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Protein Overview: APCS

General Information:
Name(s) found: APCS [HGNC (HUGO)]
Description(s) found:
Found 41 descriptions.
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  • amyloid P component, serum [HGNC (HUGO)]
    • Organism: Homo sapiens
    Length: 223 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPLLWISV LTSLLEAFAH TDLSGKVFVF PRESVTDHVN LITPLEKPLQ NFTLCFRAYS  60
   61 DLSRAYSLFS YNTQGRDNEL LVYKERVGEY SLYIGRHKVT SKVIEKFPAP VHICVSWESS 120
  121 SGIAEFWING TPLVKKGLRQ GYFVEAQPKI VLGQEQDSYG GKFDRSQSFV GEIGDLYMWD 180
  181 SVLPPENILS AYQGTPLPAN ILDWQALNYE IRGYVIIKPL VWV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] PSI-BLAST 56.522879 Serum amyloid P component (SAP)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • bacterial cell surface binding
    		•  2.42404943659494 bayes_pls_golite062009
  • monosaccharide binding
    		•  2.2299537316674 bayes_pls_golite062009
  • carbohydrate binding
    		•  1.90829797790335 bayes_pls_golite062009
  • binding
    		•  1.49960529341364 bayes_pls_golite062009
  • sugar binding
    		•  1.27754120053722 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.02180056687529 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.85889680769129 bayes_pls_golite062009
  • pattern binding
    		•  0.83687933614214 bayes_pls_golite062009
  • heparin binding
    		•  0.831838523439571 bayes_pls_golite062009
  • transporter activity
    		•  0.768283508128459 bayes_pls_golite062009
  • receptor binding
    		•  0.60563836761885 bayes_pls_golite062009
  • extracellular matrix structural constituent
    		•  0.52360080681204 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.508842034055442 bayes_pls_golite062009
  • protein binding
    		•  0.501917973797597 bayes_pls_golite062009
  • cell surface binding
    		•  0.445616177401277 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.434943099544291 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.187717152616782 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.171925518657448 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle