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Protein Overview: NCASE_ORYSJ

General Information:
Name(s) found: NCASE_ORYSJ [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 785 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASSWLCYQ ARGFGSSRVW LWLLLALVLL NCSLVLSASP YLVGMGSFDI TGPAADVNMM  60
   61 GYANTEQIAS GIHFRLKSRA FIVAEPNGKR VVFVNIDACM ASQIVTIKVL ERLKARYGDL 120
  121 YNENNVAISG IHTHAGPGGY LQYVVYIVTS LGFVRQSFDV IVDGIEQSIV EAHNNLRPGK 180
  181 IFVNKGDLLD AGVNRSPSAY LNNPAEERSK YEYNVDKEMT LIKFVDDELG PVGSFNWFAT 240
  241 HGTSMSRTNS LISGDNKGAA ARFMEDWAEQ MGLPKQSAHA NSDDLRSLHK TSVLPRRVST 300
  301 IIPEPNEITD DLIQLASSYE ASGGRRLAGS SITRRIRSTQ QNKPKFVSAF CQSNCGDVSP 360
  361 NVLGTFCIDT NLPCDFNHST CNGKNELCYG RGPGYPDEFE STRVIGNRQF LKARDLFDSA 420
  421 SEEIQGKIDY RHTYLDFSKL EVKVSTSAGG QQTVKTCPAA MGFAFAAGTT DGPGAFDFRQ 480
  481 GDVKGNPFWK LVRNLLKTPG KDQVECHSPK PILLDTGEMK EPYDWAPAIL PVQMIRIGQL 540
  541 VILCVPGEFT TMAGRRLRDA VKTVLTSGNS EFDKNIHVVL AGLTNSYSQY ITTFEEYQIQ 600
  601 RYEGASTLYG PHTLSAYIQE FQKLAMAMIA NKEVPTNFQP PDMLDKQIGL LPGVVFDSTP 660
  661 LGVKFGDVNS DVPGNSTFNK GSTVNATFYS ACPRNDLLTD GTFALVEKLD GNNNWVPVYD 720
  721 DDDWSLRFKW SRPARLSSRS FATLEWTVPE DAAAGVYRLR HFGASKPMFG SVRHFTGTSR 780
  781 AFAVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] MSA 1.058951 View MSA. No confident structure predictions are available.
    2 View Details [278..369] deduced N/A No confident structure predictions are available.
    3 View Details [370..549] MSA 1.039972 View MSA. No confident structure predictions are available.
    4 View Details [550..642] deduced N/A No confident structure predictions are available.
    5 View Details [643..785] MSA 5.042954 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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