YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|108709554

General Information:
Name(s) found: gi|108709554 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|108709554|gb|ABF97349.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 622 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPWCPADST KPVFVGIYGA VIGGFAVSAL FFLLSSFSSL AAPPLPIPPA SAAAANLSGA  60
   61 VSGVAQPETM YNRPIWKPPP RRERMPAPRA FRLTREMVGA RARGGAIVVT FGNHAFLDFI 120
  121 LTWVRHLTDL GVDSLLVGAM DTKLLRELYL RGVPVFDMGS RMATEDAVWG SPTFHKMGRE 180
  181 KVLLINALLP FGYELLMCDT DMVWLKNPLP YLARYPDADL LTSSDQVIPT VTDDSLENWR 240
  241 EVTGAYNIGI FHWRPTEPAK RLAKDWKDLL LSDDTLWDQN AFNDLIHKKF GYPVVGEDEL 300
  301 VYSYDGKLKL GVLPASIFCS GHTYFVQGMY QQLRLEPYAV HTTFQYAGTV GKRHRLREAM 360
  361 LFFDQPSYYD SPGGFLSFRP NIPKSLLLDG AHTVKSHFAL VNYQLKQIRT ALAIASLLKR 420
  421 TLVMPPLWCR LDRMWFGHPG VLEGTMTRQP FLCPMDHVFE VHVMLKDLPK EEFGPHIDFR 480
  481 EYSFLENPSL PKQVKESFLE VELCNEHSTR CSTTNRTNKG APVLLPRNST EQTLLDIFKP 540
  541 YKDIKILQFS SMVNAFGGFS DAAVDTKFRN RVKRYVGLWC CVQLREIGHI YYDMYWDEKP 600
  601 GWKPLPPQTK VEDHPPWLEV QE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] deduced N/A No confident structure predictions are available.
    2 View Details [164..372] MSA 11.085996 View MSA. No confident structure predictions are available.
    3 View Details [373..467] deduced N/A No confident structure predictions are available.
    4 View Details [468..622] MSA 1.007936 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle