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Protein Overview: gi|110289212

General Information:
Name(s) found: gi|110289212 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|110289212|gb|ABG66125.1| HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAPKPIARL ISHVILDLDG TLLNTDCVVS QVLKPFLVKN GKKWDSKKAH KLVGKTPYEA  60
   61 AAVVLEDYGL PYSTEEFLSM LTPMFNEQWC NIKALPGANR LIKHLKSNGV PAALASNSPR 120
  121 SNIDAKISCH QGWKESFSAI VGGDEVEKGK PSPDIFLEAA KRMNTNPPNC LVIEDSLPGV 180
  181 AAGKAAGMHV IAVPSVPKRT AEFSSADEVI NSLLDVKPEK WGLPPFSDWI DDTLPIEPWF 240
  241 IGGPVIKGFG RGSKVLGIPT ANLPAENFSD VLSEHTSGVY FGWAGLSTRG IFKMVMSIGW 300
  301 NPYFDNTEKT IEPWLLHDFG EDFYGEELRL VIVGYIRPEA NFPSLESLIE RIHEDARISD 360
  361 KALNLPLYAK YKDSPYLRNS LKEDNSANGN QSVIDSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 26.045757 beta-Phosphoglucomutase
    2 View Details [219..397] PSI-BLAST 48.0 Crystal structure of riboflavin kinase with ternary product complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.263520144636139 bayes_pls_golite062009
  • phosphatase activity
    		•  0.159899259988948 bayes_pls_golite062009
  • hydrolase activity
    		•  0.157008618907775 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.103902756538853 bayes_pls_golite062009
  • DNA binding
    		•  0.0142681844140111 bayes_pls_golite062009
    2
    Term Confidence Notes
  • riboflavin kinase activity
    		•  9.29267848240079 bayes_pls_golite062009
  • FMN adenylyltransferase activity
    		•  7.46254172012226 bayes_pls_golite062009
  • kinase activity
    		•  2.06841232315201 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.04516341526682 bayes_pls_golite062009
  • adenylyltransferase activity
    		•  2.0444249049462 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.03375669869689 bayes_pls_golite062009
  • catalytic activity
    		•  2.03120709726017 bayes_pls_golite062009
  • transferase activity
    		•  1.98609814060536 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.19728391053646 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle