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Protein Overview: gi|110804936, gi...

General Information:
Name(s) found: gi|110804936 [NCBI NR]
gi|110614484 [NCBI NR]
Description(s) found:
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  • gi|110804936|ref|YP_688456.1| hypothetical protein SFV_0929 [Shigella flexneri 5 str. 8401] [NCBI NR]
  • gi|110614484|gb|ABF03151.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] [NCBI NR]
  • hypothetical protein SFV_0929 [Shigella flexneri 5 str. 8401] [nr-271106-contam.fasta]
  • conserved hypothetical protein [Shigella flexneri 5 str. 8401] [nr-271106-contam.fasta]
    • Organism: Shigella flexneri 5 str. 8401
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYRIIPVTA FSQNCSLIWC EQTRLAALVD PGGDAEKIKQ EVDDSGLTLM QILLTHGHLD  60
   61 HVGAAAELAQ HYGVPVFGPE KEDEFWLQGL PAQSRMFGLE ECQPLTPDRW LNEGDTISIG 120
  121 NVTLQVLHCP GHTPGHVVFF DDRAKLLISG DVIFKGGVGR SDFPRGDHNQ LISSIKDKLL 180
  181 PLGDDVTFIP GHGPLSTLGY ERLHNPFLQD EMPVW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 32.09691 X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.31184084417389 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle