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Protein Overview: COX5A_MOUSE, COX...

General Information:
Name(s) found: COXA_MOUSE [Swiss-Prot]
COX5A_MOUSE [Swiss-Prot]
Description(s) found:
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  • pir||S05495 cytochrome-c oxidase (EC 1.9.3.1) chain Va precursor - mouse [NCBI NR]
  • gi|6680986|ref|NP_031773.1| cytochrome c oxidase, subunit Va [Mus musculus] [NCBI NR]
  • gi|50527|emb|CAA34085.1| cytochrome c oxidase subunit Va preprotein [Mus musculus] [NCBI NR]
  • gi|117099|sp|P12787|COX5A_MOUSE Cytochrome c oxidase subunit 5A, mitochondrial precursor (Cytochrome c oxidase polypeptide Va) [NCBI NR]
  • (P12787) Cytochrome c oxidase polypeptide Va, mitochondrial precursor (EC 1.9.3.1) [Swiss-Prot]
  • Cytochrome c oxidase subunit 5A, mitochondrial precursor - Mus musculus (Mouse) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):9-57687519 Cytochrome c oxidase polypeptide Va, mitochondrial precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • cytochrome c oxidase, subunit Va [HMR_022704-rand.fasta]
  • cytochrome c oxidase, subunit Va [Mus musculus]gi|90420|pir||S05495 cytochrome-c oxidase (EC 1.9.3.1) chain Va precursor - mousegi|50527|emb|CAA34085.1| cytochrome c oxidase subunit Va preprotein [Mus musculus]gi|117099|sp|P12787|COXA_MOUSE CYTOCHROME [nrdb_11152004_Chlamydomonas]
  • (NM_007747) cytochrome c oxidase, subunit Va [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • cytochrome c oxidase, subunit Va [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • cytochrome c oxidase subunit Va preprotein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Cytochrome c oxidase subunit 5A, mitochondrial precursor (Cytochrome c oxidase polypeptide Va) [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Cox5a Cytochrome c oxidase subunit 5A, mitochondrial precursor [zeeyong.fasta]
    • Organism: Mus musculus
    Length: 145 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAAALRRCT AAAARGLLHP ASAPSPAAAV CSIRCYSHGS HETDEEFDAR WVTYFNKPDI  60
   61 DAWELRKGMN TLVGYDLVPE PKIIDAALRA CRRLNDFASA VRILEVVKDK AGPHKEIYPY 120
  121 VIQELRPTLN ELGISTPEEL GLDKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] PSI-BLAST 56.69897 Cytochrome c oxidase subunit E

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  3.17508902275132 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  3.17508902275132 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  3.17508902275132 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  3.01926404256257 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.48623828492701 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.43546484273392 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.40887178381842 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.38049510826628 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.30022495955501 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.26811367723859 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.25458305670463 bayes_pls_golite062009
  • transporter activity
    		•  1.24576383861713 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.22524434109813 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.9065222124517 bayes_pls_golite062009
  • catalytic activity
    		•  0.279408230112184 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle