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Protein Overview: gi|107104587

General Information:
Name(s) found: gi|107104587 [NCBI NR]
Description(s) found:
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  • gi|107104587|ref|ZP_01368505.1| hypothetical protein PaerPA_01005666 [Pseudomonas aeruginosa PACS2] [NCBI NR]
  • hypothetical protein PaerPA_01005666 [Pseudomonas aeruginosa PACS2] [nr-271106-contam.fasta]
    • Organism: Pseudomonas aeruginosa PACS2
    Length: 259 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSFVLLAFT LSLLAGCSSG PRLNTDYTSA NQDSRVQFIV LHYTSTDLPH SLGILTHGGV  60
   61 SAHYLIGDDE PATVYRLVDE NRRAWHAGVS EWQGRTWLNA TSIGIEIVNQ GYRDTPQGRV 120
  121 WYPFSEAQIQ ALIPLLKDIA KRHGITPDRI IGHSDIAPGR KVDPGPLFPW KRLADAGLVP 180
  181 WPKPGELARR LAELNGQLPD VRWFQQQLAR HGYLVPQTGE LEKDTRDVIG AFQMKYRPAR 240
  241 FDGEPDLETA ALLLAVPTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] PSI-BLAST 57.045757 No description for 2bgxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • N-acetylmuramoyl-L-alanine amidase activity
    		•  5.29207604418857 bayes_pls_golite062009
  • peptidoglycan binding
    		•  5.10635543502728 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  3.20235326428146 bayes_pls_golite062009
  • N-acetyl-anhydromuramoyl-L-alanine amidase activity
    		•  1.8723848738588 bayes_pls_golite062009
  • pattern binding
    		•  1.3169647365105 bayes_pls_golite062009
  • hydrolase activity
    		•  1.08510134637257 bayes_pls_golite062009
  • catalytic activity
    		•  0.628556091191359 bayes_pls_golite062009
  • receptor activity
    		•  0.165305685738616 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle