YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: MRE11_ORYSI

General Information:
Name(s) found: MRE11_ORYSI [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|90265185|emb|CAH67656.1| H0410G08.11 [Oryza sativa (indica cultivar-group)] [NCBI NR]
  • Double-strand break repair protein MRE11 OS=Oryza sativa subsp. indica GN=H0410G08.11 PE=3 SV=1 [Swiss-Prot]
  • H0410G08.11 [Oryza sativa (indica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Indica Group
    Length: 705 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDESNTLRV LVATDCHLGY MEKDEIRRFD SFEAFEEICS LAEQNKVDFV LLGGDLFHEN  60
   61 KPSRSTLVKT IEILRRYCLN DQPVKFQVVS DQTINFPNRF GQVNYEDPNF NVGLPVFTIH 120
  121 GNHDDPAGVD NLSAIDILSA CNLVNYFGKM DLGGSGVGEI AVYPVLVKKG TTFVALYGLG 180
  181 NIRDERLNRM FQTPHAVQWM RPETQDGMSV SDWFNILVLH QNRIKTNPKS AINEHFLPRF 240
  241 LDFIVWGHEH ECLIDPQEVP GMGFHITQPG SSVATSLIDG EAKPKHVLLL EIKGNQYRPT 300
  301 KIPLRSVRPF HYAEVVLKDE VDVDPNDQAS VLEHLDKIVR NLIKKSSQPT ASRPETKLPL 360
  361 IRIKVDYSGF STINPQRFGQ KYVGKVANPQ DILIFSKSAK KRQTTGVGNI DDSEKLRPEE 420
  421 LNQQTIEALV AENNLKMEIL PVDDLDIALH DFVSKDDKMA FYACLQRNLE ETRTKLNSEA 480
  481 DKFKIEEEDI IVKVGECMQE RVKERSLRSK EDSRFTSSSQ NLDTGGRSVT AQSNLNSFSD 540
  541 DEDTREMLLG ARTTNAGRKA SGFTRPSKDA TDVAKTGTSR RGRGRGTASM KQTTLNFSQS 600
  601 RSSAAIRSEE VQSSSDEENE TNEANEVVES SEPEESPQQT GRKRAAPRGG RGRGRGATAK 660
  661 RGRKADISSI QSMLMSKDDD DDDEDDRPKK PPPRVTRNYG AVRRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..397] PSI-BLAST 42.09691 Mre11
    2 View Details [398..564] deduced N/A No confident structure predictions are available.
    3 View Details [565..705] MSA 3.169995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.868467185939998 bayes_pls_golite062009
  • hydrolase activity
    		•  0.63676719824861 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.46273977460329 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.30428003695269 bayes_pls_golite062009
  • phosphatase activity
    		•  0.12690085186887 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle