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Protein Overview: gi|13277855, gi|...

General Information:
Name(s) found: gi|74151378 [NCBI NR]
gi|6680988 [NCBI NR]
gi|567766 [NCBI NR]
gi|56078778 [NCBI NR]
gi|26386158 [NCBI NR]
gi|148687915 [NCBI NR]
gi|13277855 [NCBI NR]
gi|12832359 [NCBI NR]
gi|1094404 [NCBI NR]
gi|1083282 [NCBI NR]
Description(s) found:
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  • gi|74151378|dbj|BAE38808.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|6680988|ref|NP_031774.1| cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus] [NCBI NR]
  • gi|567766|gb|AAA53066.1| cytochrome c oxidase [NCBI NR]
  • gi|56078778|gb|AAH52816.1| Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus] [NCBI NR]
  • gi|26386158|dbj|BAB31662.2| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|148687915|gb|EDL19862.1| cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus] [NCBI NR]
  • gi|13277855|gb|AAH03807.1| Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus] [NCBI NR]
  • gi|12832359|dbj|BAB22073.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|1094404|prf||2106151A cytochrome c oxidase:SUBUNIT=VIa [NCBI NR]
  • pir||S52088 cytochrome-c oxidase (EC 1.9.3.1) - mouse [NCBI NR]
  • Ensembl_locations(Chr-bp):5-112578537 Cytochrome c oxidase, subunit VI a, polypeptide 1 [hmr_yeast5_DM3-1_pombe.fasta]
  • cytochrome c oxidase, subunit VI a, polypeptide 1; subunit VIaL (liver-type) [HMR_022704-rand.fasta]
  • Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610009H24 product:cytochrome c oxidase, subunit VI a, polypeptide 1, full insert sequence [ipi.MOUSE.v3.06.fasta]
  • cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]gi|13277855|gb|AAH03807.1| Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]gi|1083282|pir||S52088 cytochrome-c oxidase (EC 1.9.3.1) - mousegi|567766|gb|AAA53066.1| cytochro [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Adult male kidney cDNA, RIKEN full-length enriched library, clone:0610009H24 product:cytochrome c oxidase, subunit VI a, polypeptide 1, full insert sequence [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_007748) cytochrome c oxidase, subunit VI a, polypeptide 1; subunit VIaL (liver-type) [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610009H24 product:cytochrome c oxidase, subunit VI a, polypeptide 1, full insert sequence [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • cytochrome c oxidase:SUBUNIT=VIa [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • cytochrome c oxidase [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MUS MUSCULUS ADULT MALE KIDNEY CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:0610009H24 PRODUCT:CYTOCHROME C OXIDASE, SUBUNIT VI A, POLYPEPTIDE 1, FULL INSERT SEQUENCE [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Cox6a1 Cytochrome c oxidase polypeptide VIa [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Cox6a1 Adult male kidney cDNA, RIKEN full-length enriched library, clone:0610009H24 product:cytochrome c oxidase, subunit VI a, polypeptide 1, full insert sequence [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Cox6a1 Cytochrome c oxidase polypeptide VIa ENSMUSG00000041697 IPI00121443 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • cytochrome c oxidase subunit 6A1, mitochondrial [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00121443.1|SWISS-PROT:P43024|TREMBL:Q9DCW5|ENSEMBL:ENSMUSP00000047661|REFSEQ:NP_031774|VEGA:OTTMUSP00000015557 Tax_Id=10090 Gene_Symbol=Cox6a1 Cytochrome c oxidase polypeptide VIa [ipi.MOUSE.fasta.20090209]
  • Cytochrome c oxidase polypeptide VIa OS=Mus musculus GN=Cox6a1 [011711_HMR.fasta]
  • Tax_Id=10090 Gene_Symbol=Cox6a1 Cytochrome c oxidase subunit 6A, mitochondrial [EBI_IPI_mouse_V3_87_09-27-2011_reversed.fasta]
  • Cytochrome c oxidase subunit 6A, mitochondrial OS=Mus musculus GN=Cox6a1 PE=2 SV=1 [uniprot-mouse-120502.fasta]
  • tr|Q9DCW5|Q9DCW5_MOUSE Cytochrome c oxidase subunit 6A, mitochondrial OS=Mus musculus GN=Cox6a1 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Cytochrome c oxidase subunit 6A, mitochondrial OS=Mus musculus GN=Cox6a1 PE=3 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Cytochrome c oxidase polypeptide VIa OS=Mus musculus GN=Cox6a1 PE=2 SV=1 [UniProt_mouse_01-27-2011_reversed.fasta]
  • Isoform of P43024, Cytochrome c oxidase subunit 6A, mitochondrial OS=Mus musculus GN=Cox6a1 PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 112 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMASAVLSAS RVSRPLGRAL PGLRRPMSSG AHGEEGSARM WKALTYFVAL PGVGVSMLNV  60
   61 FLKSRHEEHE RPPFVAYPHL RIRTKPFPWG DGNHTLFHNP HVNPLPTGYE DE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 29.69897 Mitochondrial cytochrome c oxidase subunit VIa

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  0.43268723383487 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.43268723383487 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.43268723383487 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.280428750542101 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.13082545919054 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.04800265254548 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle