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Protein Overview: CNCG_RAT

General Information:
Name(s) found: CNCG_RAT [Swiss-Prot]
Description(s) found:
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  • gi|47117643|sp|P61250.1|CNCG_RAT RecName: Full=Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma; Short=GMP-PDE gamma [NCBI NR]
  • gi|16758508|ref|NP_446140.1| phosphodiesterase 6H [Rattus norvegicus] [NCBI NR]
  • gi|149049135|gb|EDM01589.1| phosphodiesterase 6H, cGMP-specific, cone, gamma, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|12002843|gb|AAG43400.1|AF169390_1 cone-like cGMP-phosphodiesterase 6 gamma subunit [Rattus norvegicus] [NCBI NR]
  • Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma OS=Rattus norvegicus GN=Pde6h PE=3 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):4-180185425 Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase gamma-subunit [hmr_yeast5_DM3-1_pombe.fasta]
  • phosphodiesterase 6G, cGMP-specific, rod, gamma [HMR_022704-rand.fasta]
  • phosphodiesterase 6G, cGMP-specific, rod, gamma [Rattus norvegicus]gi|10441740|gb|AAG17170.1| cone-like cGMP-phosphodiesterase 6 gamma subunit type 2 [Mus musculus]gi|12002843|gb|AAG43400.1| cone-like cGMP-phosphodiesterase 6 gamma subunit [Rattus norve [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase gamma-subunit [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • (NM_053688) phosphodiesterase 6G, cGMP-specific, rod, gamma [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma (GMP-PDE gamma) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • cone-like cGMP-phosphodiesterase 6 gamma subunit [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • phosphodiesterase 6H, cGMP-specific, cone, gamma, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 RETINAL CONE RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE GAMMA-SUBUNIT [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • phosphodiesterase 6H, cGMP-specific, cone, gamma [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase gamma-subunit (GMP-PDE gamma) [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Pde6h Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma [rat-ipi-250309-contam.fasta]
  • Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma OS=Rattus norvegicus GN=Pde6h [011711_HMR.fasta]
  • Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma OS=Rattus norvegicus GN=Pde6h PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 83 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: activation of MAPK activity [UNKNOWN][IEA]
    biological_process [ND]
    positive regulation of epidermal growth factor receptor signaling pathway [UNKNOWN][IEA]
    visual perception [IEA]
    response to stimulus [IEA]
    positive regulation of G-protein coupled receptor protein signaling pathway [UNKNOWN][IEA]
    Molecular Function: cGMP binding [IEA]
    molecular_function [ND]
    3',5'-cyclic-nucleotide phosphodiesterase activity [IEA]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSPCLSPP APSQGPTTPR KGPPKFKQRQ TRQFKSKPPK KGVKGFGDDI PGMEGLGTDI  60
   61 TVICPWEAFS HLELHELAQF GII

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] PSI-BLAST 31.0 No description for 2ju4A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle