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Protein Overview: gi|62653738, gi|...

General Information:
Name(s) found: gi|62653738 [NCBI NR]
gi|157817795 [NCBI NR]
gi|149041800 [NCBI NR]
gi|109484751 [NCBI NR]
Description(s) found:
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  • gi|62653738|ref|XP_576417.1| PREDICTED: similar to complexin III [Rattus norvegicus] [NCBI NR]
  • gi|157817795|ref|NP_001102765.1| complexin 3 [Rattus norvegicus] [NCBI NR]
  • gi|149041800|gb|EDL95641.1| similar to Complexin III (predicted) [Rattus norvegicus] [NCBI NR]
  • gi|109484751|ref|XP_001071808.1| PREDICTED: similar to complexin III [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):8-59770170 [hmr_yeast5_DM3-1_pombe.fasta]
  • Tax_Id=10116 PREDICTED: similar to Complexin III [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 18 kDa protein [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • complexin 3 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • similar to Complexin III (predicted) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 17KDA PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • PREDICTED: similar to complexin III [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Cplx3 complexin 3 [rat-ipi-250309-contam.fasta]
  • Similar to Complexin III (Predicted) OS=Rattus norvegicus GN=Cplx3 [011711_HMR.fasta]
  • Similar to Complexin III (Predicted) OS=Rattus norvegicus GN=Cplx3 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Protein Cplx3 OS=Rattus norvegicus GN=Cplx3 PE=4 SV=1 [Aridor_1205.fasta]
  • Protein Cplx3 OS=Rattus norvegicus GN=Cplx3 PE=1 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 158 amino acids

    Gene Ontology:
    Cellular Component: [NOT]nucleus [UNKNOWN]
    cytosol [UNKNOWN]
    synapse [UNKNOWN]
    plasma membrane [UNKNOWN]
    Biological Process: neurotransmitter transport [IEA]
    regulation of neurotransmitter secretion [UNKNOWN]
    Molecular Function: syntaxin binding [IEA]
    SNARE binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFMVKSMVG GQLKNLTGSL GGGEDKGDGD KSAAEAQGMS REEYEEYQKQ LVEEKMERDA  60
   61 QFTQRKAERA TLRSHFRDKY RLPKNETDES QIQLAGGDVE LPRELAKMIE EDTEEEEDKA 120
  121 SVLGQLASLP GLDLSSLKDK AQTTLGDLKQ SAEKCHIM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] Pfam 7.408935 No description for PF05835.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle