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Protein Overview: CG5565-PA

General Information:
Name(s) found: CG5565-PA / FBpp0077609 [FlyBase]
Description(s) found:
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  • gi|7296084|gb|AAF51379.1| CG5565 [Drosophila melanogaster] [NCBI NR]
  • gi|28557659|gb|AAO45235.1| GH20954p [Drosophila melanogaster] [NCBI NR]
  • gi|226437699|gb|ACO56237.1| MIP05159p [Drosophila melanogaster] [NCBI NR]
  • gi|223966395|emb|CAR92934.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966393|emb|CAR92933.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966391|emb|CAR92932.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966389|emb|CAR92931.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966387|emb|CAR92930.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966385|emb|CAR92929.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966383|emb|CAR92928.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966381|emb|CAR92927.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966377|emb|CAR92925.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223966375|emb|CAR92924.1| CG5565-PA [Drosophila melanogaster] [NCBI NR]
  • gi|20129151|ref|NP_608598.1| CG5565 [Drosophila melanogaster] [NCBI NR]
  • gi|116811138|emb|CAL25804.1| CG5565 [Drosophila melanogaster] [NCBI NR]
  • gi|116811136|emb|CAL25803.1| CG5565 [Drosophila melanogaster] [NCBI NR]
  • gi|116811134|emb|CAL25802.1| CG5565 [Drosophila melanogaster] [NCBI NR]
  • gi|116811132|emb|CAL25801.1| CG5565 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5565 (CG5565, FBgn0031335). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:1354911..1355924. It has the cytological map location 22A1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: phosphoglycolate phosphatase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: metabolic process. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5565-PA translation from_gene[CG5565 CG5565 FBgn0031335] seq_release:3 mol_weight=26480 cds_boundaries:(2L:1,356,643..1,357,434[-]) aa_length:240 transcript_info:[CG5565-RA seq_release:3] gene_info:[gene symbol:CG5565 FBgn0031335 gene_boundaries:(2L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VQ04) CG5565 protein (GH20954p) [DrosMelano7227.FASTAC.txt]
  • (AE003586) CG5565 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5565-PA [Drosophila melanogaster]gi|28557659|gb|AAO45235.1| GH20954p [Drosophila melanogaster]gi|20129151|ref|NP_608598.1| CG5565-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(1354974..1355629,1355702..1355768); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379; MD5 [fly-100309-contam.fasta]
  • GH20954p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5565-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5565 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(1354974..1355629,1355702..1355768); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379; MD5=0099c4992ae54794684324087ce1b62b; length=240; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(1354974..1355629,1355702..1355768); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379; MD5=0099c4992ae54794684324087ce1b62b; length=240; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5565 OS=Drosophila melanogaster GN=CG5565-RA PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(1354974..1355629,1355702..1355768); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379,FlyMine:FBpp0077609,modMine:FBpp0077609; MD5=0099c4992ae54794684324087ce1b62b; length=240; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(join(1355702..1355768,1354974..1355629)); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379,FlyMine:FBpp0077609,modMine:FBpp0077609; MD5=0099c4992ae54794684324087ce1b62b; length=240; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(1355702..1355768,1354974..1355629)); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379,FlyMine:FBpp0077609,modMine:FBpp0077609; MD5=0099c4992ae54794684324087ce1b62b; length=240; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0077609 type=protein; loc=2L:complement(join(1355702..1355768,1354974..1355629)); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379,FlyMine:FBpp0077609,modMine:FBpp0077609; MD5=0099c4992ae54794684324087ce1b62b; length=240; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(1355702..1355768,1354974..1355629)); ID=FBpp0077609; name=CG5565-PA; parent=FBgn0031335,FBtr0077944; dbxref=FlyBase:FBpp0077609,FlyBase_Annotation_IDs:CG5565-PA,GB_protein:AAF51379.1,REFSEQ:NP_608598,GB_protein:AAF51379,UniProt/TrEMBL:Q9VQ04,FlyMine:FBpp0077609,modMine:FBpp0077609; MD5=0099c4992ae54794684324087ce1b62b; length=240; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: phosphoglycolate phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTKKCYCPV THVIFDCDGT LIDSEGIYLK TVQDLLAKYG KTYTKVDQTQ HMGMPVGTFS  60
   61 QHIVKDLKLP LSPAEFQKEF EAAVDKSMGS VALLPGVRDL ILHLHEYRIP FCIATSSFRK 120
  121 LFKVKAESFK DIFLAFHHVV CGDDPALGPG RGKPYPDIYL LAASRFNPPA DPKKCLIFED 180
  181 APVGLIGGKA AGSQVIFIPT DNVSKQQKKG ATMVLKSMAD FKPELFGLPP FDTCSKFEFG 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 32.221849 No description for 2pibA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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