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Protein Overview: gammaSnap-PA

General Information:
Name(s) found: gammaSnap-PA / FBpp0072096 [FlyBase]
Description(s) found:
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  • gi|6013202|gb|AAF01283.1|AF177988_1 gamma-soluble NSF attachment protein; gamma-SNAP [Drosophila melanogaster] [NCBI NR]
  • gi|21428894|gb|AAM50166.1| GH13039p [Drosophila melanogaster] [NCBI NR]
  • gi|17137734|ref|NP_477469.1| gamma-soluble NSF attachment protein [Drosophila melanogaster] [NCBI NR]
  • gi|10727076|gb|AAF47147.2| gamma-soluble NSF attachment protein [Drosophila melanogaster] [NCBI NR]
  • The gene Ã?&#142;Ã?³-soluble NSF attachment protein is referred to in FlyBase by the symbol Dmel\Ã?&#142;Ã?³Snap (CG3988, FBgn0028552). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19934668..19936412. It has the cytological map location 60B5. It is reported to have molecular function</span>: soluble NSF attachment protein activity. There is experimental evidence that it is involved in the biological process</span>: wing disc dorsal/ventral pattern formation. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG3988-PA translation from_gene[CG3988 gammaSnap FBgn0028552] seq_release:3 mol_weight=33696 cds_boundaries:(2R:19,090,854..19,092,401[-]) aa_length:302 transcript_info:[CG3988-RA seq_release:3] gene_info:[gene symbol:gammaSnap FBgn0028552 gene_bounda [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9U6R9) Gamma-soluble NSF attachment protein (GH13039p) [DrosMelano7227.FASTAC.txt]
  • (AE003462) gammaSnap gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG3988-PA [Drosophila melanogaster]gi|21428894|gb|AAM50166.1| GH13039p [Drosophila melanogaster]gi|6013202|gb|AAF01283.1| gamma-soluble NSF attachment protein; gamma-SNAP [Drosophila melanogaster]gi|17137734|ref|NP_477469.1| CG3988-PA [Drosophila melan [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(19934806..19934844,19935028..19935382,19935449..19935519,19935589..19935783,19935858..19935973,19936162..19936229,19936292..19936356); ID=FBpp0072096; name=gammaSnap-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp00 [fly-100309-contam.fasta]
  • gamma-soluble NSF attachment protein; gamma-SNAP [Drosophila melanogaster] [nr-271106-contam.fasta]
  • gamma-soluble NSF attachment protein CG3988-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH13039p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG3988-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(19934806..19934844,19935028..19935382,19935449..19935519,19935589..19935783,19935858..19935973,19936162..19936229,19936292..19936356); ID=FBpp0072096; name=gammaSnap-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp0072096,FlyBase_Annotation_IDs:CG3988-PA,GB_protein:AAF47147.2,REFSEQ:NP_477469,GB_protein:AAF47147; MD5=59fecce20b5cf02169119d617fc648eb; length=302; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(19934806..19934844,19935028..19935382,19935449..19935519,19935589..19935783,19935858..19935973,19936162..19936229,19936292..19936356); ID=FBpp0072096; name=gammaSnap-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp0072096,FlyBase_Annotation_IDs:CG3988-PA,GB_protein:AAF47147.2,REFSEQ:NP_477469,GB_protein:AAF47147; MD5=59fecce20b5cf02169119d617fc648eb; length=302; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • GH13039p OS=Drosophila melanogaster GN=gammaSnap PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(19934806..19934844,19935028..19935382,19935449..19935519,19935589..19935783,19935858..19935973,19936162..19936229,19936292..19936356); ID=FBpp0072096; name=gammaSnap-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp0072096,FlyBase_Annotation_IDs:CG3988-PA,GB_protein:AAF47147.2,REFSEQ:NP_477469,GB_protein:AAF47147,FlyMine:FBpp0072096,modMine:FBpp0072096; MD5=59fecce20b5cf02169119d617fc648eb; length=302; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • GH13039p OS=Drosophila melanogaster GN=gammaSnap PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2R:complement(join(24048769..24048833,24048639..24048706,24048335..24048450,24048066..24048260,24047926..24047996,24047505..24047859,24047283..24047321)); ID=FBpp0072096; name=gammaSnap1-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp0072096,FlyBase_Annotation_IDs:CG3988-PA,GB_protein:AAF47147.2,REFSEQ:NP_477469,GB_protein:AAF47147,FlyMine:FBpp0072096,modMine:FBpp0072096; MD5=59fecce20b5cf02169119d617fc648eb; length=302; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(24048769..24048833,24048639..24048706,24048335..24048450,24048066..24048260,24047926..24047996,24047505..24047859,24047283..24047321)); ID=FBpp0072096; name=gammaSnap1-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp0072096,FlyBase_Annotation_IDs:CG3988-PA,GB_protein:AAF47147.2,REFSEQ:NP_477469,GB_protein:AAF47147,FlyMine:FBpp0072096,modMine:FBpp0072096; MD5=59fecce20b5cf02169119d617fc648eb; length=302; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • GH13039p OS=Drosophila melanogaster GN=gammaSnap1 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0072096 type=protein; loc=2R:complement(join(24048769..24048833,24048639..24048706,24048335..24048450,24048066..24048260,24047926..24047996,24047505..24047859,24047283..24047321)); ID=FBpp0072096; name=gammaSnap1-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp0072096,FlyBase_Annotation_IDs:CG3988-PA,GB_protein:AAF47147.2,REFSEQ:NP_477469,GB_protein:AAF47147,FlyMine:FBpp0072096,modMine:FBpp0072096; MD5=59fecce20b5cf02169119d617fc648eb; length=302; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(24048769..24048833,24048639..24048706,24048335..24048450,24048066..24048260,24047926..24047996,24047505..24047859,24047283..24047321)); ID=FBpp0072096; name=gammaSnap1-PA; parent=FBgn0028552,FBtr0072187; dbxref=FlyBase:FBpp0072096,FlyBase_Annotation_IDs:CG3988-PA,GB_protein:AAF47147.2,REFSEQ:NP_477469,GB_protein:AAF47147,UniProt/TrEMBL:Q9U6R9,FlyMine:FBpp0072096,modMine:FBpp0072096; MD5=59fecce20b5cf02169119d617fc648eb; length=302; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 302 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [NAS]
    Golgi apparatus [IEA]
    endoplasmic reticulum [IEA]
    Biological Process: synaptic vesicle priming [NAS]
    wing disc dorsal/ventral pattern formation [IGI]
    intracellular protein transport [IEA]
    neurotransmitter secretion [NAS]
    Molecular Function: soluble NSF attachment protein activity [NAS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGIAAKKIA EAEDLVKQAE KSLKLSMLKW VPDYDSAADE YSKAATAYRI AKSYDKSKEC  60
   61 FLKAIDAYKN NKSWFHAAKA YEQIILLSKD ADKLHEVEEY ANKSASLYQQ HGSPEAAASA 120
  121 LDKAAKLTES KHPDMALRFY QHALEVIMIE DSVRQAAEYA SKVSRILVKL RRYDEATNAL 180
  181 KKEISLNQQT ESYGQIGRLV VALVMVQLAR GDSVEAEKTF REWGNCCEPE EVSTLQTLLQ 240
  241 AFDDEDPELA ARMLASPFIR HMDVEYAILS KNIPLPQGIQ MEKKAGDTAA ETNDAEDEGG 300
  301 LC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] PSI-BLAST 25.221849 No description for 2ifuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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