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Protein Overview: Surf4-PA

General Information:
Name(s) found: Surf4-PA / FBpp0082571 [FlyBase]
Description(s) found:
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  • gi|7300004|gb|AAF55176.1| surfeit 4, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|6094371|sp|O18405.1|SURF4_DROME RecName: Full=Surfeit locus protein 4 homolog [NCBI NR]
  • gi|24647117|ref|NP_732016.1| surfeit 4, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|2440050|emb|CAA75100.1| SURF-4 protein [Drosophila melanogaster] [NCBI NR]
  • gi|23171354|gb|AAN13656.1| surfeit 4, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|21392162|gb|AAM48435.1| RE62265p [Drosophila melanogaster] [NCBI NR]
  • gi|17137312|ref|NP_477222.1| surfeit 4, isoform A [Drosophila melanogaster] [NCBI NR]
  • Surfeit locus protein 4 homolog OS=Drosophila melanogaster GN=Surf4 PE=2 SV=1 [Swiss-Prot]
  • (O18405) Surfeit locus protein 4 homolog [Swiss-Prot]
  • The gene Surfeit 4 is referred to in FlyBase by the symbol Dmel\Surf4 (CG6202, FBgn0019925). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11169375..11171905. It has the cytological map location 88F1. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG6202-PA translation from_gene[CG6202 Surf4 FBgn0019925] seq_release:3 mol_weight=30546 cds_boundaries:(3R:11,170,007..11,171,699[-]) aa_length:270 transcript_info:[CG6202-RA seq_release:3] gene_info:[gene symbol:Surf4 FBgn0019925 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG6202-PB translation from_gene[CG6202 Surf4 FBgn0019925] seq_release:3 mol_weight=30546 cds_boundaries:(3R:11,170,007..11,171,699[-]) aa_length:270 transcript_info:[CG6202-RB seq_release:3] gene_info:[gene symbol:Surf4 FBgn0019925 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003708) Surf4 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG6202-PB, isoform B [Drosophila melanogaster]gi|7300004|gb|AAF55176.1| CG6202-PA, isoform A [Drosophila melanogaster]gi|21392162|gb|AAM48435.1| RE62265p [Drosophila melanogaster]gi|24647117|ref|NP_732016.1| CG6202-PB [Drosophila melanogaster]gi|17137 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1, [fly-100309-contam.fasta]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082572; name=Surf4-PB; parent=FBgn0019925,FBtr0083118; dbxref=FlyBase:FBpp0082572,FlyBase_Annotation_IDs:CG6202-PB,GB_protein:AAN13656.1, [fly-100309-contam.fasta]
  • SURF-4 protein [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG6202-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG6202-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Surfeit locus protein 4 homolog [nr-271106-contam.fasta]
  • Surfeit 4 CG6202-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Surfeit 4 CG6202-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE62265p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1,REFSEQ:NP_477222,GB_protein:AAF55176; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082572; name=Surf4-PB; parent=FBgn0019925,FBtr0083118; dbxref=FlyBase:FBpp0082572,FlyBase_Annotation_IDs:CG6202-PB,GB_protein:AAN13656.1,REFSEQ:NP_732016,GB_protein:AAN13656; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1,REFSEQ:NP_477222,GB_protein:AAF55176; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082572; name=Surf4-PB; parent=FBgn0019925,FBtr0083118; dbxref=FlyBase:FBpp0082572,FlyBase_Annotation_IDs:CG6202-PB,GB_protein:AAN13656.1,REFSEQ:NP_732016,GB_protein:AAN13656; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1,REFSEQ:NP_477222,GB_protein:AAF55176,FlyMine:FBpp0082571,modMine:FBpp0082571; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(11169986..11170072,11170135..11170545,11170611..11170874,11171631..11171681); ID=FBpp0082572; name=Surf4-PB; parent=FBgn0019925,FBtr0083118; dbxref=FlyBase:FBpp0082572,FlyBase_Annotation_IDs:CG6202-PB,GB_protein:AAN13656.1,REFSEQ:NP_732016,GB_protein:AAN13656; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(15345909..15345959,15344889..15345152,15344413..15344823,15344264..15344350)); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1,REFSEQ:NP_477222,GB_protein:AAF55176,FlyMine:FBpp0082571,modMine:FBpp0082571; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(15345909..15345959,15344889..15345152,15344413..15344823,15344264..15344350)); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1,REFSEQ:NP_477222,GB_protein:AAF55176,FlyMine:FBpp0082571,modMine:FBpp0082571; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0082571 type=protein; loc=3R:complement(join(15345909..15345959,15344889..15345152,15344413..15344823,15344264..15344350)); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1,REFSEQ:NP_477222,GB_protein:AAF55176,FlyMine:FBpp0082571,modMine:FBpp0082571; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(15345909..15345959,15344889..15345152,15344413..15344823,15344264..15344350)); ID=FBpp0082571; name=Surf4-PA; parent=FBgn0019925,FBtr0083117; dbxref=FlyBase:FBpp0082571,FlyBase_Annotation_IDs:CG6202-PA,GB_protein:AAF55176.1,REFSEQ:NP_477222,GB_protein:AAF55176,UniProt/Swiss-Prot:O18405,FlyMine:FBpp0082571,modMine:FBpp0082571; MD5=d1af42328185dd90941672c93d9991ff; length=270; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISS]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIPNEYIAK TEDVAEQVIK RGKNVLPTVA RLCLIATFFE DGLRMYIQWN EQREYMDMSW  60
   61 GCGKFLATVF VLVNLLGQLG GCGMVMARFK VDIAVGLLFF IVVLQTVAYS ILWDFQFLLR 120
  121 NFALIGALLL VLAEARIEGR SLFAGVPSMG ENKPKNFMQL AGRILLAFMF ITLIRFELSV 180
  181 WQVIQDIIGS ILMVLVVLGY KTKLSALILV ALLTILNLYH NAWWTIPSYK PLRDFLKYDF 240
  241 FQTLSVIGGL LMIVSLGPGG VSMDEHKKKW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] MSA 3.076958 View MSA. No confident structure predictions are available.
    2 View Details [155..270] MSA 107.125997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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