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Protein Overview: CG5849-PA

General Information:
Name(s) found: CG5849-PA / FBpp0083523 [FlyBase]
Description(s) found:
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  • gi|24648784|ref|NP_650979.1| CG5849 [Drosophila melanogaster] [NCBI NR]
  • gi|23171909|gb|AAF55911.2| CG5849 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5849 (CG5849, FBgn0038897). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:17565827..17570153. It has the cytological map location 93F7-93F8. Based on sequence similarity, it is predicted to have molecular function</span>: aminopeptidase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: proteolysis. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG5849-PA translation from_gene[CG5849 CG5849 FBgn0038897] seq_release:3 mol_weight=111985 cds_boundaries:(3R:17,556,854..17,561,042[+]) aa_length:968 transcript_info:[CG5849-RA seq_release:3] gene_info:[gene symbol:CG5849 FBgn0038897 gene_boundaries: [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VD87) CG5849 protein [DrosMelano7227.FASTAC.txt]
  • CG5849-PA [Drosophila melanogaster]gi|24648784|ref|NP_650979.1| CG5849-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(17565890..17566365,17567389..17567547,17567607..17568081,17568150..17568388,17568464..17569709,17569770..17570081); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs [fly-100309-contam.fasta]
  • CG5849-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(17565890..17566365,17567389..17567547,17567607..17568081,17568150..17568388,17568464..17569709,17569770..17570081); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs:CG5849-PA,GB_protein:AAF55911.2,REFSEQ:NP_650979,GB_protein:AAF55911; MD5=ace60b2137205f3dda8293ed04cd1170; length=968; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(17565890..17566365,17567389..17567547,17567607..17568081,17568150..17568388,17568464..17569709,17569770..17570081); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs:CG5849-PA,GB_protein:AAF55911.2,REFSEQ:NP_650979,GB_protein:AAF55911; MD5=ace60b2137205f3dda8293ed04cd1170; length=968; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5849, isoform A OS=Drosophila melanogaster GN=CG5849 PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(17565890..17566365,17567389..17567547,17567607..17568081,17568150..17568388,17568464..17569709,17569770..17570081); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs:CG5849-PA,GB_protein:AAF55911.2,REFSEQ:NP_650979,GB_protein:AAF55911,FlyMine:FBpp0083523,modMine:FBpp0083523; MD5=ace60b2137205f3dda8293ed04cd1170; length=968; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(21740168..21740643,21741667..21741825,21741885..21742359,21742428..21742666,21742742..21743987,21744048..21744359); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs:CG5849-PA,GB_protein:AAF55911.2,REFSEQ:NP_650979,GB_protein:AAF55911,FlyMine:FBpp0083523,modMine:FBpp0083523; MD5=ace60b2137205f3dda8293ed04cd1170; length=968; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(21740168..21740643,21741667..21741825,21741885..21742359,21742428..21742666,21742742..21743987,21744048..21744359); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs:CG5849-PA,GB_protein:AAF55911.2,REFSEQ:NP_650979,GB_protein:AAF55911,FlyMine:FBpp0083523,modMine:FBpp0083523; MD5=ace60b2137205f3dda8293ed04cd1170; length=968; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG5849, isoform A OS=Drosophila melanogaster GN=CG5849 PE=4 SV=2 [DROME.fasta.20160308]
  • FBpp0083523 type=protein; loc=3R:join(21740168..21740643,21741667..21741825,21741885..21742359,21742428..21742666,21742742..21743987,21744048..21744359); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs:CG5849-PA,GB_protein:AAF55911.2,REFSEQ:NP_650979,GB_protein:AAF55911,FlyMine:FBpp0083523,modMine:FBpp0083523; MD5=ace60b2137205f3dda8293ed04cd1170; length=968; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(21740168..21740643,21741667..21741825,21741885..21742359,21742428..21742666,21742742..21743987,21744048..21744359); ID=FBpp0083523; name=CG5849-PA; parent=FBgn0038897,FBtr0084125; dbxref=FlyBase:FBpp0083523,FlyBase_Annotation_IDs:CG5849-PA,GB_protein:AAF55911.2,REFSEQ:NP_650979,GB_protein:AAF55911,UniProt/TrEMBL:Q9VD87,FlyMine:FBpp0083523,modMine:FBpp0083523; MD5=ace60b2137205f3dda8293ed04cd1170; length=968; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 968 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEA]
    Molecular Function: zinc ion binding [IEA]
    aminopeptidase activity [ISS]
    metallopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITPPSGVVV LVTLGLLVSG SMGERERSLR LPNATYPLFY QLHISSDIHK GQLLFSGNAT  60
   61 IDVAIRQSTN EIVLHAKNLT DIQITVHRLM AEGSEIVDDL THTLHPTAAL LIIHPIENYQ 120
  121 AFEEGQQYRL EILYTAIMAS RPAGLYYMDY RDEENNHTVY VAATQCEPTY GRLIFPCYDE 180
  181 PGFKSNFSIK ITHGSSHSAI SNMPVKEVLA HGDLKTTSFH TTPPISTYLV AFVISDFGSI 240
  241 SETYRGITQS IYTSPTSKEK GQVALKNAVR TVAALEDYFG VSYPLPKLDH VALKKNYGAA 300
  301 MENWGLITYK DVNLLKNISS DGQKRKLDLI TQNHEIAHQW FGNLVSPEWW TYTWMNEGFA 360
  361 TYFSYVITDL IYPNDKMMDM FMTHEADSAY SYNSFFDVHP MSHYVEGEKD IMGVFDIISY 420
  421 KRGACVIKMF HHAFRQKLFV RGISHFLEKY RYSVANELNL FDALHSELQD DEYFSHQPWA 480
  481 SRIREIMLSW THSEWLPILV VTRNYENNTI TFTQRSVHMK DELWWIPINF ATTQSPNFED 540
  541 TQVDMFMPPQ PQYTVSLEDL NIHVSGRDWI MVNKQHTGFY LVRYDTDNLM AIARQLQTNH 600
  601 SVIHPINRLG LFRDLGPLIE HNEIEQVEVV FELLKYLELE EDVLTWNQLQ DTIECLTRNL 660
  661 HGTSSQSLFN EFVRRLVGPT FRRVYVEQGV NLAEDGMFRG ILEIACSADL PECLEYTRRL 720
  721 AKEHIIDKIY FKDGSDYHAI IDSVLCMGVR YLSDQDFQRI IDMMQEIDRA SVYYDDIIYA 780
  781 LRCTQSHRHL LYYLEGLMGE NSTHMVLSEF EDLMYLLYIY KSNLASRPVI WQYIERNYKV 840
  841 LCRAPNFLEH FKQLAGFVPR HQRSHFERLR QTIANHMMQE GLNTNQTLIE VDSPLVGKKM 900
  901 KITENFQDKF EQQIHKWLLN ELPQATSRSD ALLSASLSAA NGSSRPQGVL KEATRVLRSA 960
  961 LRIVDMYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..968] PSI-BLAST 125.0 Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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