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Protein Overview: SPAC5D6.07c

General Information:
Name(s) found: SPAC5D6.07c [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • PXA domain protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 495 amino acids

    Gene Ontology:
    Cellular Component: endosome [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    integral to endosome membrane [NAS]
    Biological Process: vacuole organization [IMPLink to PubMed article]
    signal transduction [RCALink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    retrograde transport, endosome to Golgi [IMPLink to PubMed article]
    late endosome to vacuole transport via multivesicular body sorting pathway [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLSSLLNP IISKILEIYV YSWYSGISKD ALFPSQCEQV GGSIVHELEK RLSRQDAMDL  60
   61 LFYEIPFLLI KHIENTEEAK LRFALPQGQI LEIDTIYHSL HPHIALEKEE NELVYCRLLV 120
  121 EDILKYLLPA TNSKSEIECV ILREALAVQI HKSIQVASSP ETMYKFIIYL SKAILQPSRR 180
  181 PWKESITTAV RWVWHAFRIL LITRGVPYFS TAWFQFYLKL FSQKDNVSSS DLTRWFFFYT 240
  241 LLYPWIALVS AFVAETMTLC CIVTIFYDKN VNRQWKQYIL TSVSNMDKGN PSGGSQSTNV 300
  301 TTFRRFSQSS YPRRSNYRRR ISTSSKSLYE LSPSKFKSIP ITSNPPPMLN LSKGSTSVEP 360
  361 TFCETNASVA LSTVTSTPVF STDSSPLSSR TRENLLSLIP SAVSSPTKAN TNKSHQRSFS 420
  421 IPKATKDSQT PSENSAATLK QAAIDAYSQI PVIPFFLPSD KLIMLVESEY RNKHIFYSLL 480
  481 NSFTMVMFPE LRHTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] Pfam 93.119186 No description for PF02194.6 was found. No confident structure predictions are available.
    2 View Details [175..410] deduced N/A No confident structure predictions are available.
    3 View Details [411..495] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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