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Protein Overview: gi|7522461, gi|1...

General Information:
Name(s) found: gi|7522461 [NCBI NR]
gi|6013112 [NCBI NR]
gi|19114191 [NCBI NR]
Description(s) found:
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  • pir||T37667 probable cytochrome c oxidase assembly protein - fission yeast (Schizosaccharomyces pombe) (fragment) [NCBI NR]
  • gi|6013112|emb|CAB57323.1| SPAC1420.04c [Schizosaccharomyces pombe] [NCBI NR]
  • ref|NP_593279.1| putative cytochrome c oxidase assembly protein [Schizosaccharomyces pombe] [NCBI NR]
  • Putative cytochrome c oxidase assembly protein (Fragment) [pompep4896]
  • Cox1101 protein (Cox11 protein) (Spapb17e12.01c protein) (Spac1420.04c protein) (Fragment) [4896.FASTAC]
  • putative cytochrome c oxidase assembly protein [Schizosaccharomyces pombe]gi|6013112|emb|CAB57323.1| SPAC1420.04c [Schizosaccharomyces pombe]gi|7522461|pir||T37667 probable cytochrome c oxidase assembly protein - fission yeast (Schizosaccharomyces pombe [nrdb_11152004_Chlamydomonas]
  • (Q9UTM2) Putative cytochrome c oxidase assembly protein (Fragment) [pompep4896_normal_reversed]
  • SPAC1420.04c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 695 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISSHRPEASS LLDFLVKDQK KSGDISLHTK FNLYVDDLLK KSEKGQIKKF INDIKKDLAT  60
   61 ESQLPLSAPF KDESTRTMTD PQVLAYIHQS MPYQYASLYS VLTDLKIVNS DVSCKSQHIL 120
  121 DCGKGPGIGA LASYSVFPTP NSVSIVEENP FLKKIIYDIH HNIYPSTSPN PTSPVTLNRL 180
  181 PLGKKDSYTL VIASNKLLEM KSEKELFDYL RSLWSLVSND GGLLVLCERG TKRGFSLIQR 240
  241 ARTFLLQKSK NTSDKQFNAH IVAPCPHDGR CPIDIENGVR ANICSFKQHF FLSPFSRLYV 300
  301 PRSHRRSSDR SHYSYVVIQK GITRPLNNTT QRFKNDEDLL ENVNVTSPTL KNWPRIIRPP 360
  361 LKRDGHVIID VCDSDARLRR NIVPKSQGKL AYRLARKSAW GDLFPLEGKV QSTSPSSKIT 420
  421 KHLKDASSTY SINPPSYNKP KVERNTTADP IFVGKRFYST NRHKAFSRFA DFNSHRFPCI 480
  481 FTSFSCYNCI SGTRKYSRQY SRDKFHYNQR TTIYYLVAIS IFALGLTYAA VPLYRLFCSK 540
  541 TGYGGTLNTD QSRMNAERMV PRKDNKRIRV TFNGDVAGNL SWKLWPQQRE IYVLPGETAL 600
  601 GFYTAENTSD HDIVGVATYN IVPGQAAVYF SKVACFCFEE QKLDAHEKVD LPVFFFIDPE 660
  661 FADDPNMKDI DDILLSYTFF EARYDTNGNL LTKLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 13.522879 Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adensyl-L-methionine (SAM)
    2 View Details [249..507] deduced N/A No confident structure predictions are available.
    3 View Details [508..695] PSI-BLAST 68.221849 Solution Structure of apoCox11, 30 structures

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  1.07321114919891 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.837368219068434 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.644010137949015 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.635463629299812 bayes_pls_golite062009
  • RNA binding
    		•  0.460713129603544 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  0.431436890079007 bayes_pls_golite062009
  • binding
    		•  0.398865224607474 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.290696180200503 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  0.197622476100051 bayes_pls_golite062009
  • DNA binding
    		•  0.11976394186826 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.115501290464633 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0754824189649688 bayes_pls_golite062009
  • protein binding
    		•  0.0283208412023089 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • structural molecule activity
    		•  5.33211785603403 bayes_pls_golite062009
  • binding
    		•  1.26238051646126 bayes_pls_golite062009
  • copper ion binding
    		•  0.19463795974816 bayes_pls_golite062009
  • catalytic activity
    		•  0.176396048613815 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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