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Protein Overview: SPBC17A3.09c

General Information:
Name(s) found: SPBC17A3.09c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • lipoate-protein ligase A [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: lipoate metabolic process [IC]
    Molecular Function: ATP binding [IEA]
    lipoate-protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEAVTNPKS SLATFSKQLN GLLQAKVVVC KSVNPYFNLA LENYLYENST AKHCLLLYTN  60
   61 SPSVIIGRNQ NPWVEANVKL CRDNFVNIIR RKSGGGTVFH DFGNLNYSVL MNREEFSHTE 120
  121 NASIMIQALR NLGVHARLNQ RHDIVLAQSQ RKISGSAYKI SRNRCYHHGT MLLNSDLEGV 180
  181 REYLRSPSTG ILSKGVSSTR SPVSNTKLLK AEFIKQVISC FLLHKSHSTT TKPLSKPRAS 240
  241 SKRLYDIEPK SVITLEQNDL LGVPSILKAV NELQSWEWTF GQTPSFKQHL ESTELSVSMD 300
  301 ISVVHGRLEK VIFSTPNATL EHELSSIPWT GLCYESGFAN TFLISGIHSK EAISILKWIS 360
  361 DSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 87.69897 Crystal Structure of Lipate-Protein Ligase A from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminoacyl-tRNA ligase activity
    		•  4.025601351766 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  4.02412423650651 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  4.02412423650651 bayes_pls_golite062009
  • ligase activity
    		•  3.51191116674556 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
    		•  0.685157827624735 bayes_pls_golite062009
  • binding
    		•  0.654061227819536 bayes_pls_golite062009
  • protein binding
    		•  0.380604392484225 bayes_pls_golite062009
  • catalytic activity
    		•  0.256292883613773 bayes_pls_golite062009
  • glycine-tRNA ligase activity
    		•  0.134313783036163 bayes_pls_golite062009
  • threonine-tRNA ligase activity
    		•  0.133891091298639 bayes_pls_golite062009
  • serine-tRNA ligase activity
    		•  0.0218173339521677 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle