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Protein Overview: CE05309

General Information:
Name(s) found: CE05309 [WormBase]
Description(s) found:
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  • WBGene00007735 status:Partially_confirmed TR:Q18173 protein_id:CAA94574.1 [WormBase]
  • pir||T19471 hypothetical protein C25G4.8 - Caenorhabditis elegans [NCBI NR]
  • gi|3874419|emb|CAA94574.1| C. elegans protein C25G4.8, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17538782|ref|NP_502382.1| hypothetical protein C25G4.8 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05309 WBGene00007735 status:Partially_confirmed TR:Q18173 protein_id:CAA94574.1 [wormpep150.fasta]
  • 05309 WBGene00007735 status:Partially_confirmed TR:Q18173 protein_id:CAA94574.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative cytoplasmic protein family member (4N224) [Caenorhabditis elegans]gi|3874419|emb|CAA94574.1| Hypothetical protein C25G4.8 [Caenorhabditis elegans]gi|7496512|pir||T19471 hypothetical protein C25G4.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q18173 protein_id:CAA94574.1 [wormpep115.fasta.reversed]
  • CE05309 status:Predicted TR:Q18173 protein_id:CAA94574.1 [wormpep80.hongbin]
  • CE05309 WBGene00007735 status:Partially_confirmed UniProt:Q18173_CAEEL protein_id:CAA94574.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05309 WBGene00007735 status:Partially_confirmed UniProt:Q18173_CAEEL protein_id:CAA94574.1| [wormORF-contam.fasta]
  • Hypothetical protein C25G4.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C25G4.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep229-AG1201-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 402 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAMHMEQKI YKAKFSEYQL ADNFINFNYL LKFKLGPEDV RAKGAFSTIF ESTMLDWDLQ  60
   61 LHKQFAGHIL HSRESNWVIS LNGSGVRDSY PPLHKLYFKV KAMGSDGSIK KSLKYFIDGL 120
  121 PIAPAERRGR MDHRSYTTLQ NTQFERDLST LIAEAKKKAQ TIQLETRLEF KKNDLVDMKY 180
  181 LLGNGAPNMP DSLDYYFDAI TNKSRHDLKL KTSDGMHFVM TNKEIVCLAS QFFRQHLKDT 240
  241 TTEYTVGRAD SVQSIDICLT YMITGIYKKP ALLSPKLAFE IFALAMQWKV FEPKVLKNSI 300
  301 EKHCCEELQK NYEDIMYVCN MLIIADDAQF ANVQNCCIAT LVFYHAHDFI RIFVIGNHPL 360
  361 KERFSRRQEF LRPSLTMQVK RAFAASNESK CFIKFLPAIG ED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] deduced N/A No confident structure predictions are available.
    2 View Details [274..402] MSA 2.011977 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle