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Protein Overview: vpr-1

General Information:
Name(s) found: vpr-1 / CE09902 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00018008 locus:vpr-1 Major sperm protein status:Confirmed UniProt:O44782 protein_id:CCD66445.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMP]
    nematode larval development [IMP]
    embryonic development ending in birth or egg hatching [IMP]
    positive regulation of growth rate [IMP]
    molting cycle, collagen and cuticulin-based cuticle [IMP]
    growth [IMP]
    reproduction [IMP]
    Molecular Function: structural molecule activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKHSLLQV TPNRELVFTG PFSDVVTSHM TLKNTSTNPV CFKVKTTAPK QYCVRPNSGL  60
   61 LKSGDSKQIT VMLQPLEGIP SDAGRHKFMV QSCVAPSEDL PDLESVWKII DPAELTYSKL 120
  121 MVTFVDKRDP ASGDDTKTFA VRNEDSFASS GQAQELGSSY SGTPSHDGTV NSLRKSLKST 180
  181 VDEKEELQKK VHGLEQEIEV MLKKNRKLQQ SHSDGALVDG AYPTLQIFLI AVAALLIGLI 240
  241 VGRLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] PSI-BLAST 36.39794 Solution structure of the MSP domain of mouse VAMP-associated proteinA
    2 View Details [138..245] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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