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Protein Overview: CE12336

General Information:
Name(s) found: CE12336 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00010834 locus:mct-3 status:Partially_confirmed UniProt:Q93896 protein_id:CAB01766.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 596 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    organic anion transport [IEALink to PubMed article]
    Molecular Function: secondary active monocarboxylate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDNNQQADE KAAAHQDPET VEKELEDAGF IAPPDGGYGW AIVAASFLLN MIVDGVIFTV  60
   61 GKILQPAWVH SFGISEASAA MTMSILSGCY FFAGPIASVL CNVFGCRQVA LAGSLIAALG 120
  121 FLLSISAPNI YVLYVSFGLI AGAGFGMMYL PAIVIISQYF AKKRSVATGI AVCGSGIGTT 180
  181 VFALLNDVVW DFVGGDWKQF LVYTAAVTIS GLGACILLRP LKPSKDQIEK VAKVLEDYEE 240
  241 HKEKVPESPL LSKHNTPFLS SLELHTAGKL ENGHHTGSIK SIVDAVSKEI EDLNKPLLRK 300
  301 DIFYSGSTTN IAARSRTGTM TREEAAEHQQ SLRFRGKVET PQQYLSKADL NAGDNGDVAI 360
  361 ANESKIQEIK QALKQLVDKE LLFSPSFLLL AFSGTLTLCC FYVPFIYLGN HLDKIEGLTT 420
  421 AEKSFTVSLI GVLNIVARIG CGILADRPEV SALAVNNFAL IAAGLATMTV PLYTAYWQFL 480
  481 AFCVPFSIGV ACFAALRSII VVELIGLEKL SNAFGILLTF MGVGAVVGSP LAAAMKDYTG 540
  541 NFDTSFYVMG ALMTISGAMC IPLGGLRKRE LARSDSSDAK KAIELQKLTD TQDNTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..472] PSI-BLAST 18.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [473..596] FFAS03 2.78 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • binding
    		•  0.818732184064642 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle