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Protein Overview: CE27893

General Information:
Name(s) found: CE27893 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00017013 status:Partially_confirmed UniProt:Q18914 protein_id:CCD64415.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: signal transduction [IEALink to PubMed article]
    Molecular Function: receptor binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQDTKDEHL TSFAENPTKS VERDALVEPQ FTRPEQVEKT HVEEAKWPWG KGKKNENFRM  60
   61 PRFLVTILLI CLLVAALLIA LIAIVWALNS NSASVREPEI VYTIPSRDNQ KDNVVHARSN 120
  121 IPKTLKKSLD LLEEDTTTIT TTTSQTPDDY DTTEPFVEEE EYHLEEATEH HEIATIEATT 180
  181 PEPSEIATKK PIIYYSPPTT PKTTTSTGYL QFYDSIDGDA SDNCLERLAL GSPSGVYSIQ 240
  241 SVEKFQAFCD MDTTTGGWTV IQRRVDGDGS FHRGTMKKFV EGFGNLQGSH WLGLEKLHNL 300
  301 APIGATPAIL RIEIQGETCD LTCSKRFANT WVGEWKVNFG KKQDGYKIQI TEEGVGNLTY 360
  361 NGVDPFFGAN GRRFSTNDND QDENTFMNCA QFRMVGPWWH PKSCSDVGLN GYFQTTSEKY 420
  421 DVKDRNQNAK RYFVWAFDKQ IYNGYPYTIH VRKSTMLLKT GDPQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] PSI-BLAST 4.69897 Tropomyosin
    2 View Details [90..465] PSI-BLAST 64.0 Fibrinogen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • receptor binding
    		•  1.9776581053362 bayes_pls_golite062009
  • eukaryotic cell surface binding
    		•  1.88588139563708 bayes_pls_golite062009
  • integrin binding
    		•  1.84403663032634 bayes_pls_golite062009
  • carbohydrate binding
    		•  1.60481550486624 bayes_pls_golite062009
  • cell surface binding
    		•  1.53370693640531 bayes_pls_golite062009
  • binding
    		•  0.811708735919118 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.578727264859991 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  0.27731523067605 bayes_pls_golite062009
  • protein binding
    		•  0.249736491712423 bayes_pls_golite062009
  • vascular endothelial growth factor receptor binding
    		•  0.10959185189203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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