Protein Overview: sra-13

General Information:
Name(s) found:	sra-13 / CE35552 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00005039 locus:sra-13 Serpentine receptor class alpha-13 status:Partially_confirmed UniProt:Q20618 protein_id:CAA91390.2 [WormBase] gi\|74964724\|sp\|Q20618.2\|SRA13_CAEEL RecName: Full=Serpentine receptor class alpha-13; Short=Protein sra-13 [NCBI NR] gi\|71989903\|ref\|NP_001022186.1\| Serpentine Receptor, class A (alpha) family member (sra-13) [Caenorhabditis elegans] [NCBI NR] gi\|34555927\|emb\|CAA91390.2\| C. elegans protein F49E12.5a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] Serpentine receptor class alpha-13 OS=Caenorhabditis elegans GN=sra-13 PE=2 SV=2 [Swiss-Prot] [wormpep111.fasta] Hypothetical protein F49E12.5a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] CE35552 WBGene00005039 locus:sra-13 status:Partially_confirmed TR:Q20618 protein_id:CAA91390.2 [wormpep150.fasta] 35552 WBGene00005039 locus:sra-13 status:Predicted TR:Q20618 protein_id:CAA91390.2 [wormpep130-phg-ecoli-orf-rand.fasta] CE35552 WBGene00005039 locus:sra-13 status:Predicted TR:Q20618 protein_id:CAA91390.2 [wormpep132.fasta] 35552 WBGene00005039 locus:sra-13 status:Partially_confirmed TR:Q20618 protein_id:CAA91390.2 [wormpep150-phg-orf-ecoli-rand.fasta] locus:sra-13 status:Predicted TN:CAA91390 protein_id:CAA91390.2 [wormpep115.fasta.reversed] CE35552 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:SRA13_CAEEL protein_id:CAA91390.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE35552 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:SRA13_CAEEL protein_id:CAA91390.2\| [wormORF-contam.fasta] CE35552 WBGene00005039 locus:sra-13 status:Partially_confirmed SW:Q20618 protein_id:CAA91390.2 [wormpep160-contam.fasta] Serpentine receptor class alpha-13 (Protein sra-13) [nr-271106-contam.fasta] Serpentine Receptor, class A (alpha) family member (sra-13) [Caenorhabditis elegans] [nr-271106-contam.fasta] CE35552 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:Q20618 protein_id:CAA91390.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE35552 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:Q20618 protein_id:CAA91390.2 Serpentine receptor class alpha-13 [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	335 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA]
Biological Process:	sensory perception of chemical stimulus [IEA]
Molecular Function:	transmembrane receptor activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIISSVNRT CASESLLELY RSYKYILSTS FNIIIPIISL FFLVYAIKQL CAQSIIQYST  60
   61 RVLLITTILF AVCHQIAYFC FKADLLYTML FKLDQPCNLQ HSSYDCRFIT IATTTSNCGM 120
  121 ALVQLAMSID RVFALKFNRV YYKLKSIPGI TLALITLSIS FSMFFILTID DPLSGYVNHC 180
  181 GFYPTYSQDK FHIFLDVTLY LAVFNFVFDI GLMYYSYQEI LWKRSYSFVN RFQSRISLKC 240
  241 TQAIFIISIC QCISNVLYSG LLSLLMKLGR YMSSADYNLS LSLAYTTPYS CLILPILICK 300
  301 VLEYIKKQRT VGILSLRNQK QSMEGHMAMI NSAWK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..335]	PSI-BLAST	46.39794	Rhodopsin

Protein Overview: sra-13

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: