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Protein Overview: PYRD_BACSU, PYRD...

General Information:
Name(s) found: PYRD_BACSU [Swiss-Prot]
PYRDB_BACSU [Swiss-Prot]
Description(s) found:
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  • pir||H39845 dihydroorotate oxidase (EC 1.3.3.1) pyrD - Bacillus subtilis [NCBI NR]
  • gi|143392|gb|AAA21272.1| dihydroorotase dehydrogenase [Bacillus subtilis] [NCBI NR]
  • gi|131720|sp|P25996.1|PYRD_BACSU RecName: Full=Dihydroorotate dehydrogenase, catalytic subunit; AltName: Full=Dihydroorotate oxidase; AltName: Full=DHOdehase; Short=DHODase; Short=DHOD [NCBI NR]
  • Dihydroorotate dehydrogenase, catalytic subunit OS=Bacillus subtilis GN=pyrD PE=1 SV=1 [Swiss-Prot]
  • Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit OS=Bacillus subtilis GN=pyrD PE=1 SV=1 [Swiss-Prot]
  • 311 aa - dihydroorotate dehydrogenase (catalytic subunit) [subtilist_Price.fasta]
  • dihydroorotate dehydrogenase (catalytic subunit) [Bacillus subtilis subsp. subtilis str. 168]gi|2633927|emb|CAB13428.1| dihydroorotate dehydrogenase (catalytic subunit) [Bacillus subtilis subsp. subtilis str. 168]gi|143392|gb|AAA21272.1| dihydroorotase [nrdb_11152004_Chlamydomonas]
  • dihydroorotase dehydrogenase [Bacillus subtilis] [nr-271106-contam.fasta]
  • Dihydroorotate dehydrogenase, catalytic subunit (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) [nr-271106-contam.fasta]
  • Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit OS=Bacillus subtilis (strain 168) GN=pyrD PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Bacillus subtilis
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVKLPGLD LKNPIIPASG CFGFGKEFSR FYDLSCLGAI MIKATTKEPR FGNPTPRVAE  60
   61 TGAGMLNAIG LQNPGLDSVL HHELPWLEQF DTPIIANVAG SQVDDYVEVA EHISKAPNVH 120
  121 ALELNISCPN VKTGGIAFGT NPEMAADLTK AVKEVSDVPV YVKLSPNVAN ITEIALAIEE 180
  181 AGADGLTMIN TLIGMRLDLK TGKPILANKT GGLSGPAVKP VAIRMVYEVS QMVNIPIIGM 240
  241 GGVQTAEDAL EFLLAGASAV AVGTANFVNP FACPEIIEQL PSVLLQYGYQ SIEECIGRSW 300
  301 NHEKQPAHHR A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 62.69897 Dihydroorotate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • dihydroorotate dehydrogenase activity
    		•  2.73800716363956 bayes_pls_golite062009
  • dihydroorotate oxidase activity
    		•  2.35584458985229 bayes_pls_golite062009
  • catalytic activity
    		•  1.94749091175302 bayes_pls_golite062009
  • dihydropyrimidine dehydrogenase (NADP+) activity
    		•  1.76080169529176 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.34004057547793 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  0.708198550325532 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle