YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PLY10_ARATH

General Information:
Name(s) found: PLY10_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: pectate lyase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIFSRSFLA LSTTLIILAL CINSSTMAQE TEDLNSHSSS NSSTANKLPN DDGAWNEHAV  60
   61 KNPEEVAAMV DMKIKNSTER RRLGFFSCAT GNPIDDCWRC DRNWHLRRKR LANCAIGFGR 120
  121 NAIGGRDGRY YVVTDPSDHD AVNPRPGTLR HAVIQDRPLW IVFKRDMVIT LTQELIMNSF 180
  181 KTIDGRGVNV AIAGGACITI QYVTNIIIHG INVHDCRRTG NAMVRSSPSH YGWRTMADGD 240
  241 AISIFGSSHI WIDHNSLSNC ADGLIDAIMG STAITISNNY MTHHNEVMLM GHSDSYTRDK 300
  301 LMQVTIAYNH FGEGLIQRMP RCRHGYFHVV NNDYTHWVMY AIGGSANPTI NSQGNRFLAP 360
  361 GNPFAKEVTK RVGSWQGEWK QWNWRSQGDL MLNGAYFTKS GAAAPASYAR ASSLGAKPAS 420
  421 VVSMLTYSSG ALKCRIGMRC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] MSA 1.023989 View MSA. No confident structure predictions are available.
    2 View Details [76..440] PSI-BLAST 82.30103 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.142826098671881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle