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Protein Overview: ARAK_ARATH

General Information:
Name(s) found: ARAK_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||F71427 hypothetical protein - Arabidopsis thaliana [NCBI NR]
  • gi|7268362|emb|CAB78655.1| galactokinase like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2244971|emb|CAB10392.1| galactokinase like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234819|ref|NP_193348.1| ARA1 (ARABINOSE KINASE); ATP binding / L-arabinokinase/ galactokinase [Arabidopsis thaliana] [NCBI NR]
  • L-arabinokinase OS=Arabidopsis thaliana GN=ARA1 PE=1 SV=1 [Swiss-Prot]
  • (O23461) Hypothetical protein (Galactokinase like protein) [athaliana3702.FASTAC.txt]
  • galactokinase like protein [Arabidopsis thaliana]gi|2244971|emb|CAB10392.1| galactokinase like protein [Arabidopsis thaliana]gi|7485156|pir||F71427 hypothetical protein - Arabidopsis thalianagi|15234819|ref|NP_193348.1| GHMP kinase family protein [Arab [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 GHMP kinase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ISA1, ATISA1, ARA1 | ARA1 (ARABINOSE KINASE); ATP binding / galactokinase | chr4:9120887-9127668 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • galactokinase like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ARA1 (ARABINOSE SENSITIVE 1); ATP binding / galactokinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ARA1, ISA1, ATISA1 | arabinose kinase | chr4:9120875-9127656 FORWARD LENGTH=1039 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1039 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: arabinose metabolic process [IMP]
    Molecular Function: ATP binding [ISS]
    L-arabinokinase activity [IMP]
    galactokinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS  60
   61 ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV TGAPDFVFTS EIQSPRLKIR 120
  121 KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA 180
  181 CRAAADAGIR SVCVTNFSWD FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM 240
  241 PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC 300
  301 LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY 360
  361 FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL KPCYEGGING GEIAAHILQE 420
  421 TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ 480
  481 ANENNSLVES CIDDFDILQG DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG 540
  541 GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ 600
  601 ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK 660
  661 WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS SAAVEVASMS AIAAAHGLSI 720
  721 DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW 780
  781 GIDSGIRHSV GGADYRSVRV GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL 840
  841 EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA 900
  901 RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM 960
  961 QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI LEIQQRYKAA TGYLPLIFEG1020
 1021 SSPGAGKFGY LRIRRRISL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..437] PSI-BLAST 55.39794 Peptidoglycan biosynthesys glycosyltransferase MurG
    2 View Details [438..1039] PSI-BLAST 90.09691 x-ray structure of human N-acetyl galactosamine kinase complexed with Mg-ADP and N-acetyl galactosamine 1-phosphate


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle