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Protein Overview: gi|15239524, gi|...

General Information:
Name(s) found: gi|67633882 [NCBI NR]
gi|15239524 [NCBI NR]
gi|10177262 [NCBI NR]
Description(s) found:
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  • gi|67633882|gb|AAY78865.1| oxidoreductase [Arabidopsis thaliana] [NCBI NR]
  • gi|15239524|ref|NP_200211.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177262|dbj|BAB10730.1| ethylene-forming-enzyme-like dioxygenase [Arabidopsis thaliana] [NCBI NR]
  • (Q9FN27) Ethylene-forming-enzyme-like dioxygenase [athaliana3702.FASTAC.txt]
  • ethylene-forming-enzyme-like dioxygenase [Arabidopsis thaliana]gi|15239524|ref|NP_200211.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oxidoreductase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:21935002-21936290 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ethylene-forming-enzyme-like dioxygenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:21917776-21919064 REVERSE LENGTH=349 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Ethylene-forming-enzyme-like dioxygenase OS=Arabidopsis thaliana GN=At5g54000 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 349 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: oxidoreductase activity [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKPKLKTVQ EVVAAGEKLP ERYLYTPTGD GEGDQPFNGL LPEMKISIID LNLLFSSSDD  60
   61 GREELSKLHS AISTWGVVQV MNHGISEALL DKIHELTKQF FVLPTKEKQK YAREISSFQG 120
  121 FGNDMILSDD QVLDWVDRLY LITYPEDQRQ LKFWPENPSG FRETLHEYTM KQQLVVEKFF 180
  181 KALARSLELE DNCFLEMHGE NATLETRFNI YPPCPRPDKV LGLKPHSDGS AFTLILPDKN 240
  241 VEGLQFLKDG KWYKASILPH TILINVGDTM EVMSNGIYKS PVHRVVLNGK KERIYVATFC 300
  301 NADEDKEIQP LNGLVSEARP RLYKAVKKSE KNFFDYYQQG RRPIEAAMI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 91.522879 No description for 2brtA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • binding
    		•  0.588242505102319 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0678642854814351 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle