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Protein Overview: MSL4_ARATH

General Information:
Name(s) found: MSL4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8671879|gb|AAF78442.1|AC018748_21 Contains similarity to a putative protein T30F21.6 gi|4836872 from Arabidopsis thaliana BAC T30F21 gb|AC007260 and contains an uncharacterized protein PF|00924 family [NCBI NR]
  • pir||G96574 hypothetical protein T3F20.21 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15220793|ref|NP_175752.1| MSL4 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 4) [Arabidopsis thaliana] [NCBI NR]
  • Mechanosensitive ion channel protein 4 OS=Arabidopsis thaliana GN=MSL4 PE=3 SV=1 [Swiss-Prot]
  • (Q9LPG3) T3F20.21 protein [athaliana3702.FASTAC.txt]
  • Contains similarity to a putative protein T30F21.6 gi|4836872 from Arabidopsis thaliana BAC T30F21 gb|AC007260 and contains an uncharacterized protein PF|00924 familygi|25405634|pir||G96574 hypothetical protein T3F20.21 [imported] - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Mechanosensitive ion channel domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein | chr1:19962255-19965246 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Contains similarity to a putative protein T30F21.6 gi|4836872 from Arabidopsis thaliana BAC T30F21 gb|AC007260 and contains an uncharacterized protein PF|00924 family [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MSL4 | mechanosensitive channel of small conductance-like 4 | chr1:19958587-19961578 FORWARD LENGTH=881 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 881 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVDSTDQRR DFVVRIDGED NGDSEKFWRE SSINFWHNDK SSKPPGGEED DGSFDFMRRS  60
   61 SEKSEEPDPP SKLINQFLNK QKASGDEISL DMEANMPELQ KNTVPPLSST AVSGSASPVT 120
  121 APVTASYRNG TGDAIRRRQN RVTLSPSVKD GDSSEDEENR VDGSEVVKCT SNRSTMRTKT 180
  181 LMKMKTRSRL MDPPTPTYPD MVSGRTPRSG NLNPGFSGRN TKPGTPNQGG SKDLEEEEDP 240
  241 FSEEDLPEGL RKEKICVWVI IEWIFLILII ASLICSLVIP YLRGKTLWDL ALWKWEVMVL 300
  301 VLICGRLVSS WIVKLFVYFV ESNFLWRKKV LYFVYGIRKP VQNCLWLGLV LIAWHFLFDK 360
  361 KVEREMRSTV LKYVTKVLIC LLVAVIIWLI KTLLVKVLAS SFHMSTYFDR IQESLFTQYV 420
  421 IETLSGPPRI EIHIEEEKVA NDVKTFEIVG RKLSPLGPKA VSSPPQVTVG SGRLQKSPSR 480
  481 VGKSPVLSRS GSKKEGGEEG IRIDHLQRMN TKNVSAWKMK KLMNVIKKGT LSTLDEQIQD 540
  541 TTTQEDDKAT QIRSEFEAKL AARKIFQNVA EPGSRYIYME DFMRFLSEDE SERAMDLFEG 600
  601 ASECHKISKS CLKNWVVNAF RERRALALTL NDTKTAVNRL HRIVDVLVSI VILIIWLLIL 660
  661 GIATTKFLLV ISSQLLLVVF VFGNSCKTIF EAVIFVFVMH PFDVGDRCEI DGVQMIVEEM 720
  721 NILTTVFLRF DNQKIVYPNS LLGTKPIANY YRSPDMQDAI EFFVHIATPP EKTTALRQRI 780
  781 LSYVDNKKDH WHPSPMIVFR DMCGLNSVKI AMWPTHKMNH QNMGERYVRR GQLLEEIGRL 840
  841 CRELDIEYRL YPLNINVKSL PAATPITSDR IPPSWNQQRS V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 4.0 No description for 1y0fA was found.
    2 View Details [241..452] deduced N/A No confident structure predictions are available.
    3 View Details [453..578] deduced N/A No confident structure predictions are available.
    4 View Details [579..881] PSI-BLAST 63.522879 No description for 2oauA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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