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Protein Overview: gi|18401429, gi|...

General Information:
Name(s) found: gi|222424030 [NCBI NR]
gi|21554187 [NCBI NR]
gi|20197650 [NCBI NR]
gi|18401429 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|222424030|dbj|BAH19976.1| AT2G27450 [Arabidopsis thaliana] [NCBI NR]
  • gi|21554187|gb|AAM63266.1| putative nitrilase [Arabidopsis thaliana] [NCBI NR]
  • gi|20197650|gb|AAD15597.2| putative nitrilase [Arabidopsis thaliana] [NCBI NR]
  • gi|18401429|ref|NP_565650.1| NLP1 (NITRILASE-LIKE PROTEIN 1); N-carbamoylputrescine amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ  60
   61 REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN TAHYNSIAII DADGTDLGIY 120
  121 RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF 180
  181 YPTAIGSEPQ DQGLDSRDHW RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT 240
  241 SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 57.0 Crystal Structure of Hypothetical Protein PH0642 from Pyrococcus horikoshii

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.35962310800332 bayes_pls_golite062009
  • N-carbamoylputrescine amidase activity
    		•  0.749539597459006 bayes_pls_golite062009
  • hydrolase activity
    		•  0.06604196264626 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle