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Protein Overview: CHUP1_ARATH

General Information:
Name(s) found: CHUP1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75273319|sp|Q9LI74.1|CHUP1_ARATH RecName: Full=Protein CHUP1, chloroplastic; AltName: Full=Protein CHLOROPLAST UNUSUAL POSITIONING 1 [NCBI NR]
  • gi|42565189|ref|NP_189197.2| CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) [Arabidopsis thaliana] [NCBI NR]
  • gi|28071265|dbj|BAC55960.1| actin binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994760|dbj|BAB03089.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1 [Swiss-Prot]
  • (Q9LI74) Similarity to pherophorin (Actin binding protein) [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|28071265|dbj|BAC55960.1| actin binding protein [Arabidopsis thaliana]gi|42565189|ref|NP_189197.2| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Hydroxyproline-rich glycoprotein family protein, Common family members: At4g18570, At4g04980, At5g61090 (Arabidopsis thaliana) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CHUP1 | CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) | chr3:9355298-9358994 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • actin binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CHUP1 | Hydroxyproline-rich glycoprotein family protein | chr3:9354061-9357757 FORWARD LENGTH=1004 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1004 amino acids

    Gene Ontology:
    Cellular Component: chloroplast outer membrane [IDA]
    chloroplast [IDA]
    Biological Process: chloroplast relocation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVRIGFVVA ASIAAVTVKR LNVKPSKPSK PSDNGEGGDK EQSVDPDYNL NDKNLQEEEE  60
   61 EEEEEVKLIN SVINQTRGSF SDYLDDDILP EFEDLLSGEI EYPLPDDDNN LEKAEKERKY 120
  121 EVEMAYNDGE LERLKQLVKE LEEREVKLEG ELLEYYGLKE QESDIVELQR QLKIKTVEID 180
  181 MLNITINSLQ AERKKLQEEL SQNGIVRKEL EVARNKIKEL QRQIQLDANQ TKGQLLLLKQ 240
  241 HVSSLQMKEE EAMNKDTEVE RKLKAVQDLE VQVMELKRKN RELQHEKREL SIKLDSAEAR 300
  301 IATLSNMTES DKVAKVREEV NNLKHNNEDL LKQVEGLQMN RFSEVEELVY LRWVNACLRY 360
  361 ELRNYQTPAG KISARDLSKN LSPKSQAKAK RLMLEYAGSE RGQGDTDLES NYSQPSSPGS 420
  421 DDFDNASMDS STSRFSSFSK KPGLIQKLKK WGKSKDDSSV QSSPSRSFYG GSPGRLSSSM 480
  481 NKQRGPLESL MIRNAGESVA ITTFGQVDQE SPGTPETPNL PRIRTQQQAS SPGEGLNSVA 540
  541 ASFHVMSKSV DNVLDEKYPA YKDRHKLAVE REKHIKHKAD QARAERFGGN VALPPKLAQL 600
  601 KEKRVVVPSV ITATGDQSNE SNESNEGKAS ENAATVTKMK LVDIEKRPPR VPRPPPRSAG 660
  661 GGKSTNLPSA RPPLPGGGPP PPPPPPGGGP PPPPGGGPPP PPPPPGALGR GAGGGNKVHR 720
  721 APELVEFYQS LMKRESKKEG APSLISSGTG NSSAARNNMI GEIENRSTFL LAVKADVETQ 780
  781 GDFVQSLATE VRASSFTDIE DLLAFVSWLD EELSFLVDER AVLKHFDWPE GKADALREAA 840
  841 FEYQDLMKLE KQVTSFVDDP NLSCEPALKK MYKLLEKVEQ SVYALLRTRD MAISRYKEFG 900
  901 IPVDWLSDTG VVGKIKLSSV QLAKKYMKRV AYELDSVSGS DKDPNREFLL LQGVRFAFRV 960
  961 HQFAGGFDAE SMKAFEELRS RAKTESGDNN NNNNNNSNEE ESVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 19.39794 Heavy meromyosin subfragment
    2 View Details [382..494] PSI-BLAST 7.69897 Tropomyosin
    3 View Details [495..680] deduced N/A No confident structure predictions are available.
    4 View Details [681..1004] PSI-BLAST 5.39794 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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