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Protein Overview: SO1640

General Information:
Name(s) found: SO1640 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
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  • gi|33516896|sp|Q8EGG4.1|FABZ_SHEON RecName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl ACP dehydrase [NCBI NR]
  • (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella oneidensis GN=fabZ PE=3 SV=1 [Swiss-Prot]
  • (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase [Shewanella oneidensis MR-1]gi|24347429|gb|AAN54695.1| (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase [Shewanella oneidensis MR-1]gi|33516896|sp|Q8EGG4|FABZ_SHEON (3R)-hydroxymyristoyl-[ [nrdb_11152004_Chlamydomonas]
  • (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase [shew_pnnl_plus_contams_psm.fasta]
  • (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase) [nr-271106-contam.fasta]
  • 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella oneidensis (strain MR-1) GN=fabZ PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Shewanella oneidensis
    Length: 154 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQMNTMDI TEILKYLPHR YPFLLIDRVL DFTPGESLHA IKNVTINEPF FQGHFPIQPV  60
   61 MPGVLILEAM AQATGLLAFK TMSDDVPPPG VLYYFAGIDN ARFRRVVEPG DQIHFEVKMI 120
  121 KERRGIGVFY GEAKVDGEVV CSAEIMCARR EINQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 46.69897 The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • CoA hydrolase activity
    		•  1.75530090056705 bayes_pls_golite062009
  • catalytic activity
    		•  1.11649534052993 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.65794221902015 bayes_pls_golite062009
  • 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
    		•  0.57527342054578 bayes_pls_golite062009
  • 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
    		•  0.57527342054578 bayes_pls_golite062009
  • acyl-CoA thioesterase activity
    		•  0.24094527143225 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle