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Protein Overview: RK27_ORYSA

General Information:
Name(s) found: RK27_ORYSA [Swiss-Prot]
Description(s) found:
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  • pir||T02788 probable ribosomal protein L27 - rice [NCBI NR]
  • gi|20139372|sp|O65037.1|RK27_ORYSJ RecName: Full=50S ribosomal protein L27, chloroplastic; AltName: Full=CL27; Flags: Precursor [NCBI NR]
  • 50S ribosomal protein L27, chloroplast precursor (CL27) - Oryza sativa (Rice) [Swiss-Prot]
  • putative 50S ribosomal protein [Oryza sativa (japonica cultivar-group)]gi|20161923|dbj|BAB90834.1| putative 50S ribosomal protein [Oryza sativa (japonica cultivar-group)]gi|20161735|dbj|BAB90651.1| putative 50S ribosomal protein [Oryza sativa (japonica [nrdb_11152004_Chlamydomonas]
    • Organism: Oryza sativa
    Length: 195 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMAFTLVG AFKGMSLSSP CHSSSSASFL RADRVSLSVG GGVGMGVPMT MPVRRLTIQM  60
   61 AHKKGAGSTK NGRDSPGQRL GVKIYGDQVA KPGAIIIRQR GTRVYPGNNV GMGKDHTLFS 120
  121 LIDGLVKFEK YGPDKKKVSV YPYEKQPENP NSYRARKREY FRMQRERKKA RAEGIVEVQL 180
  181 VLAAADESPE VNADC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] PSI-BLAST 35.0 No description for 1vs6W was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.93798084434094 bayes_pls_golite062009
  • structural molecule activity
    		•  9.3625249805433 bayes_pls_golite062009
  • peptidyltransferase activity
    		•  3.94173449567504 bayes_pls_golite062009
  • transferase activity, transferring amino-acyl groups
    		•  0.479709297593055 bayes_pls_golite062009
  • catalytic activity
    		•  0.161830442565647 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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