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View Structure Prediction Details

Protein: FRS12_ARATH
Organism: Arabidopsis thaliana
Length: 788 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRS12_ARATH.

Description E-value Query
Range
Subject
Range
FRS7_ARATH - Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1
436.0 [0..29] [788..14]
gi|115472797, gi... - gi|34898730|ref|NP_910711.1| putative far-red impaired response protein [Oryza sativa (japonica cult...
380.0 [0..14] [785..74]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVDTELTS FNNMVAKSSY PVRILHHNNG ISEDEEGGSG VEPYVGLEFD TAEEAREFYN  60
   61 AYAARTGFKV RTGQLYRSRT DGTVSSRRFV CSKEGFQLNS RTGCTAFIRV QRRDTGKWVL 120
  121 DQIQKEHNHE LGGEGSVEET TPRPSRAPAP TKLGVTVNPH RPKMKVVDES D

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 2aydA
Description: No description for 2aydA was found.

Predicted Domain #2
Region A:
Residues: [172-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RETRSCPGGF KRFKGGGGEG EVSDDHHQTQ QAKAVTGTEP YAGLEFGSAN EACQFYQAYA  60
   61 EVVGFRVRIG QLFRSKVDGS ITSRRFVCSR EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL 120
  121 NKDHNHD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [299-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEPGKKNDAG MKKIPDDGTG GLDSVDLIEL NDFGNNHIKK TRENRIGKEW YPLLLDYFQS  60
   61 RQTEDMGFFY AVELD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [374-517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNNGSCMSIF WADSRARFAC SQFGDSVVFD TSYRKGSYSV PFATIIGFNH HRQPVLLGCA  60
   61 MVADESKEAF LWLFQTWLRA MSGRRPRSIV ADQDLPIQQA LVQVFPGAHH RYSAWQIREK 120
  121 ERENLIPFPS EFKYEYEKCI YQTQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.831 N/A N/A c.2.1 NAD(P)-binding Rossmann-fold domains

Predicted Domain #5
Region A:
Residues: [518-630]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIVEFDSVWS ALINKYGLRD DVWLREIYEQ RENWVPAYLR ASFFAGIPIN GTIEPFFGAS  60
   61 LDALTPLREF ISRYEQALEQ RREEERKEDF NSYNLQPFLQ TKEPVEEQCR RLY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [631-788]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLTVFRIFQN ELVQSYNYLC LKTYEEGAIS RFLVRKCGNE SEKHAVTFSA SNLNSSCSCQ  60
   61 MFEHEGLLCR HILKVFNLLD IRELPSRYIL HRWTKNAEFG FVRDMESGVS AQDLKALMVW 120
  121 SLREAASKYI EFGTSSLEKY KLAYEIMREG GKKLCWQR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle