| Protein: | TFB1A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFB1A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
575.0 | [0..31] | [582..1] |
|
|
572.0 | [0..6] | [583..11] |
|
|
572.0 | [0..6] | [583..11] |
|
|
571.0 | [0..6] | [583..11] |
|
|
571.0 | [0..6] | [583..11] |
|
|
569.0 | [0..6] | [583..11] |
|
|
568.0 | [0..6] | [583..11] |
|
|
565.0 | [0..6] | [583..11] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MAGGQIEKLV KYKSTVKDPG TPGFLRIREG MLLFVPNDPK SDSKLKVLTQ NIKSQKYTKE 60
61 GSNKPPWLNL TNKQAKSHIF EFENYPDMHA CRDFITKALA KCELEPNKSV VST
|
| Detection Method: |  |
| Confidence: | 24.09691 |
| Match: | 1pfjA |
| Description: | Solution structure of the N-terminal PH/PTB domain of the TFIIH P62 subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [114-148] |
1 11 21 31 41 51
| | | | | |
1 SSEQLSIKEL ELRFKLLREN SELQRLHKQF VESKV
|
| Detection Method: | |
| Confidence: | 11.09691 |
| Match: | 2diiA |
| Description: | No description for 2diiA was found. |
|
Region A: Residues: [149-291] |
1 11 21 31 41 51
| | | | | |
1 LTEDEFWATR KKLLGKDSIR KSKQQLGLKS MMVSGIKPST DGRTNRVTFN LTPEIIFQIF 60
61 AEKPAVRQAF INYVPSKMTE KDFWTKYFRA EYLYSTKNTA VAAAEAAEDE ELAVFLKPDE 120
121 ILARETRHKI RRVDPTLDME ADQ
|
| Detection Method: | |
| Confidence: | 1.78 |
| Match: | 1x3aA |
| Description: | Solution structure of the BSD domain of human Synapse associated protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [292-356] |
1 11 21 31 41 51
| | | | | |
1 GDDYTHLMDH GIQRDGTMDV VEPQNDQFKR SLLQDLNRHA AVVLEGRSID VESEDTRIVA 60
61 EALTR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [357-486] |
1 11 21 31 41 51
| | | | | |
1 VKQVSKADGE TTKDANQERL ERMSRVAGME DLQAPQNFPL APLSIKDPRD YFESQQGNVL 60
61 NVPRGAKGLK RNVHEAYGLL KESILEIRAT GLSDPLIKPE VSFEVFSSLT RTIATAKNIN 120
121 GKNPRESFLD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [487-591] |
1 11 21 31 41 51
| | | | | |
1 RLPKSTKDEV LHHWTSIQEL LKHFWSSYPI TTTYLHTKVG KLKDAMSNTY SKLEAMKESV 60
61 QSDLRHQVSL LVRPMQQALD AAFHHYEVDL QRRTAKSGER PNGYV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.986 | N/A | N/A | a.8.11 | Description not found. |
