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View Structure Prediction Details

Protein: gi|50924552, gi|...
Organism: Oryza sativa Japonica Group
Length: 652 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50924552, gi|....

Description E-value Query
Range
Subject
Range
gi|113536682, gi... - gi|50909549|ref|XP_466263.1| putative calmodulin-binding protein [Oryza sativa (japonica cultivar-gr...
901.0 [0..1] [652..1]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRQGRHLER SGSKRALDAG GGGGDDDDRA PKRPRVPALA SVIVEALKVD SLQKLCSSLE  60
   61 PILRRVVSEE VERALAKLGP AATPARIQGR SSPKRIEGPS GINLQLQFRS RLSLPLFTGG 120
  121 KVEGEQGAAI HVVLLDANTG RVVTSGPESF AKLDVLVLEG DFNKEQDEDW TEEEFENHIV 180
  181 KEREGKRPLL TGDLQVTLKE GVGTIGELIF TDNSSWIRSR KFRLGLRVSS GFCEGVRVKE 240
  241 AKTEAFTVKD HRGE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [255-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYKKHYPPAL KDDVWRLEKI GKDGAFHKKL NSNGIYTVEH FLQLLVRDQQ KLRTILG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [312-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNMSNKMWES LVEHAKTCVL SGKHYIYYSS DARSVGAIFN NIYEFTGLIA DDQYISAENL  60
   61 SENQRLFADT LVKQAYDDWI NVVEYDGKEL LRFKQKKKSV TTRSDTAKAS TSYPSSY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [429-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSTHSHKQLT GGPVNIEQSS MSSMSEDGTR NMSNGSQAAR YAANPQDISQ SITMPYDMSS  60
   61 LRPEEQFAGS SIQTQASRSS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [509-652]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMLALGPTQQ QNFEFSALGQ SMQPSPLNPF DDWSRLQENR GGVDDYLMEE IRVRSHEILE  60
   61 NEEDMQQMLR ILSMGGSSAN MNHGDGFSPF MPSPAPAFNY EDDRARPSGK AVVGWLKIKA 120
  121 AMRWGIFVRK KAAERRAQLV ELED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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