| Protein: | SET5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 526 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SET5.
| Description | E-value | Query Range |
Subject Range |
|
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220.0 | [0..56] | [516..169] |
|
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209.0 | [0..56] | [516..169] |
|
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209.0 | [0..92] | [507..216] |
|
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206.0 | [0..277] | [524..107] |
|
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204.0 | [0..3] | [525..6] |
|
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203.0 | [0..92] | [507..216] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MTLTIKIGTL NDSDQSAVHN GTENGSDFRK ITPTEEEICD DVVLLWKEEP GTEDATIQHL 60
61 YDRITERNQS WKLSASRFRK ILNEHHLYDT DLETVSLYKD KIHFPKALDS DA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.646 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.635 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.635 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.603 | c.24.1 | Methylglyoxal synthase-like |
| View | Download | 0.595 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.595 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.587 | a.39.1 | EF-hand |
| View | Download | 0.586 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.539 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.433 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.391 | a.159.4 | Description not found. |
| View | Download | 0.365 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.322 | a.4.1 | Homeodomain-like |
| View | Download | 0.281 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
|
Region A: Residues: [113-433] |
1 11 21 31 41 51
| | | | | |
1 KVEVKFIDDE HGRGLFAKRD FSKGQIILKE NKPIVYIPPL DKLFLISNGK ACARCGKALY 60
61 DLTQHKIMVH YLDCEVCKAI WCSEKCKKAH ASLHELLYHS WRSNRIDILH AGNWKRFVNY 120
121 CEKYCFTAAF SVGLIYGSML LDTTGEVKEQ WQKLASISQR ERIKLRDASG IGSTFSLLNG 180
181 TTVHTEEESD NGTKKGVEKN IDDETVWEKC YELFCGAFPK ASEEIDFEKF LTMIGTFNIN 240
241 QYNGQVYHWI SFINHDCEPN AYIEQVEEHE ELRLHARKPI KKGEQIRITY VNPLHGVRLR 300
301 RRELRVNWGF LCQCDRCQNE L
|
| Detection Method: | |
| Confidence: | 35.39794 |
| Match: | 1mvhA |
| Description: | SET domain of Clr4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [434-526] |
1 11 21 31 41 51
| | | | | |
1 STFERVPNLE KKNADANLGV EKIDSNDSSE DGSKKSTGNR KSSMREAQPD LKEILKNGKE 60
61 FELDIPETVD TQGNVRKTSV RFDSNVSVAV DER
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.619 | d.95.2 | Homing endonucleases |
| View | Download | 0.528 | d.88.1 | SRF-like |
| View | Download | 0.479 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.477 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.472 | d.200.1 | Integrin beta tail domain |
