| Protein: | Y1796_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 711 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1796_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
441.0 | [0..49] | [708..8] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MSLVVGQSLG LTLVGDGLSL RNSKINVGKS KFFSVNRRRL ARAALVQARP KEDGAAASPS 60
61 PSSRPASVVQ YRRADLADDL QAEARALGRA IDASIYSPEL IARKHGS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-552] |
1 11 21 31 41 51
| | | | | |
1 QPFKALRRSL EILGALGGFA LKLGIDQKQG NLEKNMKKRA IELRRIFTRL GPTFVKLGQG 60
61 LSTRPDLCPP DYLEELAELQ DALPTFPDAE AFACIERELD LSLETIFSSV SPEPIAAASL 120
121 GQVYKAQLRY SGQVVAVKVQ RPGIEEAIGL DFYLIRGVGK LINKYVDFIT TDVLTLIDEF 180
181 ACRVYQELNY VQEAQNARRF KKLYADKADV LVPDIFWDYT SRKVLTMEWV EGTKLNEQLA 240
241 IESQGLKVLD LVNTGIQCSL RQLLEYGFFH ADPHPGNLLA TPDGKLAFLD FGMMSETPEE 300
301 ARFAIIGHVV HLVNRDYEAM ARDYYALKFL SPDVDVTPII PALRDFFDDA LNYTVSELNF 360
361 KTLVDGLGAV FYQYPFNVPP YYALILRSLT VLEGLALYAD PNFKVLAASY PYFAKRLLTD 420
421 PNPYLRDALI ELLFKDGKFR WNRLE
|
| Detection Method: | |
| Confidence: | 42.69897 |
| Match: | 2acxA |
| Description: | No description for 2acxA was found. |
|
Region A: Residues: [553-711] |
1 11 21 31 41 51
| | | | | |
1 NLLQQGSKDR DFSAKDALQP VLKLLLDPNG EELRLLVIKE AVRVSEAIAL GTVVDTYNSL 60
61 PEFLRSLVFN GNGNGPLTMS TAELQSTLEL RDQVSRIWGL LQSSESFDPA ILQPILQVLQ 120
121 QPEARRLGGR VAGGVGQRLA ARFLQQLLRA TTPSSAPSP
|
| Detection Method: | |
| Confidence: | 25.30103 |
| Match: | 1s6iA |
| Description: | Ca2+-regulatory region (CLD) from soybean calcium-dependent protein kinase-alpha (CDPK) in the presence of Ca2+ and the junction domain (JD) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.482343911625985 | bayes_pls_golite062009 |
