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Protein Overview: gi|6730422

General Information:
Name(s) found: gi|6730422 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|6730422|pdb|1DNL|A Chain A, X-Ray Structure Of Escherichia Coli Pyridoxine 5'-Phosphate Oxidase Complexed With Fmn At 1.8 Angstrom Resolution [NCBI NR]
    • Organism: Escherichia coli
    Length: 199 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGLRRRDLPA DPLTLFERWL SQACEAKLAD PTAXVVATVD EHGQPYQRIV LLKHYDEKGX  60
   61 VFYTNLGSRK AHQIENNPRV SLLFPWHTLE RQVXVIGKAE RLSTLEVXKY FHSRPRDSQI 120
  121 GAWVSKQSSR ISARGILESK FLELKQKFQQ GEVPLPSFWG GFRVSLEQIE FWQGGEHRLH 180
  181 DRFLYQREND AWKIDRLAP

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|60594470, gi|... gi|6730422

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] PSI-BLAST 74.69897 Pyridoxine 5'-phoshate oxidase (PNP oxidase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pyridoxamine-phosphate oxidase activity
    		•  3.81533880638523 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.18444956617957 bayes_pls_golite062009
  • catalytic activity
    		•  0.660906721832294 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.0268904833845668 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle