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Protein Overview: gi|16975219

General Information:
Name(s) found: gi|16975219 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|16975219|pdb|1ID0|A Chain A, Crystal Structure Of The Nucleotide Bond Conformation Of Phoq Kinase Domain [NCBI NR]
    • Organism: Escherichia coli
    Length: 152 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RELHPVAPLL DNLTSALNKV YQRKGVNISL DISPEISFVG EQNDFVEVMG NVLDNACKYC  60
   61 LEFVEISARQ TDEHLYIVVE DDGPGIPLSK REVIFDRGQR VDTLRPGQGV GLAVAREITE 120
  121 QYEGKIVAGE SMLGGARMEV IFGRQHSAPK DE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|16975219 gi|189095939, gi... gi|60594470, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] PSI-BLAST 25.69897 Histidine kinase PhoQ domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.57884608485164 bayes_pls_golite062009
  • transferase activity
    		•  0.66560190725226 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.65281383212182 bayes_pls_golite062009
  • kinase activity
    		•  0.64987928624127 bayes_pls_golite062009
  • signal transducer activity
    		•  0.47895126364598 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.47895126364598 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.41458536707017 bayes_pls_golite062009
  • protein kinase activity
    		•  0.41262128363539 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
    		•  0.270144402236579 bayes_pls_golite062009
  • protein histidine kinase activity
    		•  0.27006997723077 bayes_pls_golite062009
  • two-component sensor activity
    		•  0.22080838371957 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle