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Protein Overview: gi|57237776, gi|...

General Information:
Name(s) found: gi|57237776 [NCBI NR]
gi|57166580 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|57237776|ref|YP_179024.1| cation efflux family protein [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57166580|gb|AAW35359.1| cation efflux family protein [Campylobacter jejuni RM1221] [NCBI NR]
    • Organism: Campylobacter jejuni RM1221
    Length: 295 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cation transport [ISSLink to PubMed article]
    Molecular Function: efflux transmembrane transporter activity [ISSLink to PubMed article]
    cation transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQKKATLV ASLCAIVLAL VKFIVGLTSG SVAVLSSAID SLMDFAISAF NFLALKKSSQ  60
   61 KANENYNFGF SKIEALMGLL EGVFIVGVGI FIFYESILKI YYKEEIKDLN SSIYVMIFAL 120
  121 IMTFFLVLFL NYVAKKTKSL IIESDALHYK TDCLTNACTL GALVLIYFTN LHIIDAIFGI 180
  181 VISLYTAFSA FKIIKKALAF LMDEALPKEQ VDKICTLISN NPEIISYHEL KTRKTPSCNY 240
  241 LSVHLVFCPI ISLLNAHKIS DEIEEGVRKM FENEKWDIQI HLDPYDDAEQ ERQRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..295] PSI-BLAST 56.09691 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  4.80415740186568 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.7111088918389 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.31582321262476 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  3.70168909103546 bayes_pls_golite062009
  • transporter activity
    		•  2.75060749825863 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.61478776136804 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.49211952065411 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.29284396884348 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.28901626534199 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.25549862417229 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.01332825422669 bayes_pls_golite062009
  • binding
    		•  0.80253540865533 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.4725448545847 bayes_pls_golite062009
  • cation channel activity
    		•  0.114605430567645 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.0866732167896778 bayes_pls_golite062009
  • protein binding
    		•  0.0557829197821959 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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