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Protein Overview: CE04352

General Information:
Name(s) found: CE04352 [WormBase]
Description(s) found:
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  • WBGene00017339 status:Confirmed UniProt:Q19296 protein_id:CCD67837.1 [WormBase]
  • pir||T16025 hypothetical protein F10D7.2 - Caenorhabditis elegans [NCBI NR]
  • gi|17551570|ref|NP_510814.1| hypothetical protein F10D7.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|1072210|gb|AAA81720.1| Hypothetical protein F10D7.2 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE04352 WBGene00017339 calcium alpha subunit\; tetracycline resistance status:Partially_confirmed TR:Q19296 protein_id:AAA81720.1 [wormpep150.fasta]
  • 04352 WBGene00017339 calcium alpha subunit\; tetracycline resistance status:Partially_confirmed TR:Q19296 protein_id:AAA81720.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • tetracycline transporter-like protein (49.5 kD) (XR980) [Caenorhabditis elegans]gi|1072210|gb|AAA81720.1| Hypothetical protein F10D7.2 [Caenorhabditis elegans]gi|7498823|pir||T16025 hypothetical protein F10D7.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • calcium alpha subunit\; tetracycline resistance status:Partially_confirmed TR:Q19296 protein_id:AAA81720.1 [wormpep115.fasta.reversed]
  • CE04352 calcium alpha subunit\; tetracycline resistance status:Partially_confirmed TR:Q19296 protein_id:AAA81720.1 [wormpep80.hongbin]
  • CE04352 WBGene00017339 calcium alpha subunit\; tetracycline resistance status:Confirmed UniProt:Q19296_CAEEL protein_id:AAA81720.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04352 WBGene00017339 calcium alpha subunit\; tetracycline resistance status:Confirmed UniProt:Q19296_CAEEL protein_id:AAA81720.1| [wormORF-contam.fasta]
  • F10D7.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F10D7.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04352 WBGene00017339 calcium alpha subunit\; tetracycline resistance status:Confirmed TR:Q19296 protein_id:AAA81720.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE04352 WBGene00017339 calcium alpha subunit\; tetracycline resistance status:Confirmed UniProt:Q19296 protein_id:AAA81720.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04352 WBGene00017339 calcium alpha subunit\; tetracycline resistance status:Confirmed UniProt:Q19296 protein_id:CCD67837.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04352 WBGene00017339 status:Confirmed UniProt:Q19296 protein_id:CCD67837.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F10D7.2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: inorganic anion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: inorganic anion transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAIGPVDKK AVMKLLIPAL ICNMLAFTSI LPLFPTILNY YSKEGHRDWL YDISVKGLQS  60
   61 FQEAIGVPHS ERYDKVFFGG FLGSLFSALQ FISSPTLGSL SDIYGRRAVI SLCCIMTFIS 120
  121 YVNWLKADIF AYFVLSRILG GLSKGNINVA TAIVSDVYSP EDHPKGMALI GISYSLGFLI 180
  181 GPMIGAYFST IASIDSPFAY PAMFSIILTI LEFGFLFFLP ETLDLKEQKS LDDIKKTRKE 240
  241 LVTPKDLFQF TAVNAPQERK QEMQKVGWIY FLFLFLYSGL EFTLPFLTHI RFDFDNMQQG 300
  301 KVYLFTGLLM LPIQAKYVRK TPIEKQKAVA EFGIACIIPA YLLVAVAKTP LVLYAGLFFY 360
  361 AIASATVVTS LTSLVHVIYP QSEKGVLAGI FRSLGCLARA LGPVISSTFF WLLGATTCYI 420
  421 MGAFLLFIPL ILLKRLENPA AKKTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..445] PSI-BLAST 33.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • binding
    		•  0.805286077372817 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle