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Protein Overview: RL4B_ARATH

General Information:
Name(s) found: RL4B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7413562|emb|CAB86041.1| 60S ribosomal protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|25083642|gb|AAN72099.1| 60S ribosomal protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|22530964|gb|AAM96986.1| 60S ribosomal protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|21387109|gb|AAM47958.1| 60S ribosomal protein-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20260072|gb|AAM13383.1| 60S ribosomal protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|20143905|sp|P49691.2|RL4B_ARATH RecName: Full=60S ribosomal protein L4-2; AltName: Full=L1 [NCBI NR]
  • gi|17064752|gb|AAL32530.1| 60S ribosomal protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|16649033|gb|AAL24368.1| 60S ribosomal protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15450798|gb|AAK96670.1| 60S ribosomal protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15242558|ref|NP_195907.1| 60S ribosomal protein L4/L1 (RPL4D) [Arabidopsis thaliana] [NCBI NR]
  • pir||T48308 60S ribosomal protein-like - Arabidopsis thaliana [NCBI NR]
  • 60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=2 SV=2 [Swiss-Prot]
  • (P49691) 60S ribosomal protein L4-1 (L1) [Swiss-Prot]
  • 60S ribosomal protein-like [Arabidopsis thaliana]gi|21387109|gb|AAM47958.1| 60S ribosomal protein-like protein [Arabidopsis thaliana]gi|7413562|emb|CAB86041.1| 60S ribosomal protein-like [Arabidopsis thaliana]gi|20260072|gb|AAM13383.1| 60S ribosomal pr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L4-1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L4/L1 (RPL4D) | chr5:657828-659524 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 60S ribosomal protein L4-2 (L1) [nr-271106-contam.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L4/L1 family | chr5:657830-659526 FORWARD LENGTH=407 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytosolic ribosome [IDA]
    membrane [IDA]
    large ribosomal subunit [ISS]
    cytosolic large ribosomal subunit [IDA]
    nucleolus [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASAAARPL VTVQGLDGDM STDQSTTVTL PDVMTAPVRP DIVNFVHAQI SNNSRQPYAV  60
   61 SKKAGHQTSA ESWGTGRAVS RIPRVPGGGT HRAGQAAFGN MCRGGRMFAP TKIWRRWHRR 120
  121 VNVNMKRHAI VSAIAATAVP ALVMARGHKI ENVPEMPLVV SDSAEAVEKT SAAIKVLKQI 180
  181 GAYDDAEKAK NSIGIRPGKG KMRNRRYISR KGPLVVFGTE GAKIVKAFRN LPGVELCHVE 240
  241 RLNLLKLAPG GHLGRFVIWT KSAFEKLESI YGSFEKPSEK KKGYVLPRAK MVNADLARII 300
  301 NSDEVQSVVN PIKDGSKRAV LKKNPLKNLN VMFKLNPYAK TAKRMSLLAE ASRVKAKKEK 360
  361 LEKKRKVVTK EEAQAIKAAG KAWYQTMISD SDYTEFDNFT KWLGASQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..407] PSI-BLAST 93.0 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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